Rubromycin CA1

Details

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Internal ID 3d79b3e9-815a-4eee-ab55-37184da3e0a9
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Pyranochromenes
IUPAC Name (2S)-5',8',10-trihydroxy-7'-methoxy-4',9,9'-trioxospiro[3,4-dihydropyrano[4,3-g]chromene-2,2'-3H-benzo[f][1]benzofuran]-7-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H16O12/c1-34-12-6-11(26)15-16(18(12)28)20(30)22-10(17(15)27)7-25(37-22)3-2-8-4-9-5-13(23(31)32)35-24(33)14(9)19(29)21(8)36-25/h4-6,26,28-29H,2-3,7H2,1H3,(H,31,32)/t25-/m0/s1
InChI Key YBKJSQMTLLAGOK-VWLOTQADSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H16O12
Molecular Weight 508.40 g/mol
Exact Mass 508.06417594 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP 4.00
Atomic LogP (AlogP) 2.39
H-Bond Acceptor 11
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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CHEMBL4524212

2D Structure

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2D Structure of Rubromycin CA1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9315 93.15%
Caco-2 - 0.8066 80.66%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.8975 89.75%
OATP2B1 inhibitior - 0.7062 70.62%
OATP1B1 inhibitior + 0.8620 86.20%
OATP1B3 inhibitior + 0.9659 96.59%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.7707 77.07%
P-glycoprotein inhibitior + 0.6514 65.14%
P-glycoprotein substrate - 0.5501 55.01%
CYP3A4 substrate + 0.6455 64.55%
CYP2C9 substrate + 0.6316 63.16%
CYP2D6 substrate - 0.8697 86.97%
CYP3A4 inhibition - 0.6454 64.54%
CYP2C9 inhibition - 0.5256 52.56%
CYP2C19 inhibition - 0.5113 51.13%
CYP2D6 inhibition - 0.7611 76.11%
CYP1A2 inhibition + 0.6656 66.56%
CYP2C8 inhibition + 0.5342 53.42%
CYP inhibitory promiscuity - 0.5180 51.80%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Danger 0.6944 69.44%
Eye corrosion - 0.9838 98.38%
Eye irritation - 0.8069 80.69%
Skin irritation - 0.7318 73.18%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5085 50.85%
Micronuclear + 0.5959 59.59%
Hepatotoxicity - 0.5190 51.90%
skin sensitisation - 0.8167 81.67%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.8078 80.78%
Acute Oral Toxicity (c) I 0.5333 53.33%
Estrogen receptor binding + 0.8216 82.16%
Androgen receptor binding + 0.7392 73.92%
Thyroid receptor binding - 0.5858 58.58%
Glucocorticoid receptor binding + 0.8042 80.42%
Aromatase binding + 0.6991 69.91%
PPAR gamma + 0.6666 66.66%
Honey bee toxicity - 0.7714 77.14%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.9781 97.81%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.20% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.11% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.34% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.90% 94.00%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 95.08% 95.17%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.87% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.03% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.59% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.80% 86.33%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 90.62% 94.42%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 89.60% 96.38%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.32% 99.23%
CHEMBL3192 Q9BY41 Histone deacetylase 8 88.09% 93.99%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 84.83% 80.00%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 83.97% 96.67%
CHEMBL230 P35354 Cyclooxygenase-2 83.37% 89.63%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.18% 92.62%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.03% 99.15%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.64% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.14% 95.89%
CHEMBL4208 P20618 Proteasome component C5 80.18% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 145721006
LOTUS LTS0217499
wikiData Q105345894