Rubranoside D

Details

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Internal ID 16c03617-5380-4113-9097-731a1709632c
Taxonomy Phenylpropanoids and polyketides > Diarylheptanoids > Linear diarylheptanoids
IUPAC Name (2R,3R,4S,5S,6R)-2-[(3R)-1,7-bis(3,4-dihydroxyphenyl)heptan-3-yl]oxy-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C30H42O14/c31-14-30(40)15-42-29(27(30)39)41-13-23-24(36)25(37)26(38)28(44-23)43-18(8-5-17-7-10-20(33)22(35)12-17)4-2-1-3-16-6-9-19(32)21(34)11-16/h6-7,9-12,18,23-29,31-40H,1-5,8,13-15H2/t18-,23-,24-,25+,26-,27+,28-,29-,30-/m1/s1
InChI Key WGXOKZQPUVFATJ-PGGZZLEZSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C30H42O14
Molecular Weight 626.60 g/mol
Exact Mass 626.25745601 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 0.30
Atomic LogP (AlogP) -0.50
H-Bond Acceptor 14
H-Bond Donor 10
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Rubranoside D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7027 70.27%
Caco-2 - 0.8918 89.18%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8033 80.33%
OATP2B1 inhibitior - 0.8603 86.03%
OATP1B1 inhibitior + 0.9032 90.32%
OATP1B3 inhibitior + 0.9415 94.15%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.7706 77.06%
P-glycoprotein inhibitior + 0.6187 61.87%
P-glycoprotein substrate - 0.5064 50.64%
CYP3A4 substrate + 0.6746 67.46%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8129 81.29%
CYP3A4 inhibition - 0.9001 90.01%
CYP2C9 inhibition - 0.8370 83.70%
CYP2C19 inhibition - 0.8102 81.02%
CYP2D6 inhibition - 0.8752 87.52%
CYP1A2 inhibition - 0.8786 87.86%
CYP2C8 inhibition + 0.5602 56.02%
CYP inhibitory promiscuity - 0.8749 87.49%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5655 56.55%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9222 92.22%
Skin irritation - 0.8113 81.13%
Skin corrosion - 0.9545 95.45%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8630 86.30%
Micronuclear - 0.7200 72.00%
Hepatotoxicity - 0.7593 75.93%
skin sensitisation - 0.8714 87.14%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.7865 78.65%
Acute Oral Toxicity (c) III 0.6021 60.21%
Estrogen receptor binding + 0.7642 76.42%
Androgen receptor binding + 0.6166 61.66%
Thyroid receptor binding - 0.4917 49.17%
Glucocorticoid receptor binding - 0.5378 53.78%
Aromatase binding + 0.6847 68.47%
PPAR gamma + 0.7196 71.96%
Honey bee toxicity - 0.6959 69.59%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.7994 79.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.85% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 98.11% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.48% 94.45%
CHEMBL1951 P21397 Monoamine oxidase A 93.34% 91.49%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.80% 97.09%
CHEMBL2581 P07339 Cathepsin D 90.80% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.75% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.14% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.50% 86.92%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 88.02% 95.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.12% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.95% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 85.86% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.73% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.48% 99.17%
CHEMBL6175 Q9H3R0 Lysine-specific demethylase 4C 85.23% 96.69%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.01% 92.94%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.47% 95.83%
CHEMBL4581 P52732 Kinesin-like protein 1 84.32% 93.18%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 84.21% 92.32%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.64% 96.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.81% 94.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 82.60% 96.37%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.47% 89.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.50% 100.00%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 81.04% 92.68%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 81.04% 97.21%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.13% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alnus rubra

Cross-Links

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PubChem 10532003
LOTUS LTS0062953
wikiData Q105305036