Rubinic acid

Details

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Internal ID e9157aa6-246d-4c91-92b6-a854eec05ae1
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,5,6,6a,7,8,8a,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C30H46O4/c1-17-10-13-30(25(33)34)15-14-28(6)19(24(30)18(17)2)8-9-20-27(5)12-11-22(31)26(3,4)21(27)16-23(32)29(20,28)7/h8,17-18,20-21,23-24,32H,9-16H2,1-7H3,(H,33,34)/t17-,18+,20?,21?,23-,24+,27-,28-,29+,30+/m1/s1
InChI Key MFYBXHRQBFYAQZ-MNPGUHGCSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C30H46O4
Molecular Weight 470.70 g/mol
Exact Mass 470.33960994 g/mol
Topological Polar Surface Area (TPSA) 74.60 Ų
XlogP 5.70
Atomic LogP (AlogP) 6.27
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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CHEBI:191839
7a-Hydroxy-3-oxo-12-ursen-28-oic acid
(1S,2R,4aS,6aR,6bR,7R,12aR,14bS)-7-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-10-oxo-1,2,3,4,5,6,6a,7,8,8a,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid

2D Structure

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2D Structure of Rubinic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9930 99.30%
Caco-2 - 0.5211 52.11%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8912 89.12%
OATP2B1 inhibitior - 0.8585 85.85%
OATP1B1 inhibitior + 0.9085 90.85%
OATP1B3 inhibitior - 0.5698 56.98%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5321 53.21%
BSEP inhibitior + 0.8175 81.75%
P-glycoprotein inhibitior - 0.7188 71.88%
P-glycoprotein substrate - 0.6258 62.58%
CYP3A4 substrate + 0.6561 65.61%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8538 85.38%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9317 93.17%
CYP2C19 inhibition - 0.9604 96.04%
CYP2D6 inhibition - 0.9538 95.38%
CYP1A2 inhibition - 0.9296 92.96%
CYP2C8 inhibition + 0.4928 49.28%
CYP inhibitory promiscuity - 0.9544 95.44%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6941 69.41%
Eye corrosion - 0.9945 99.45%
Eye irritation - 0.9380 93.80%
Skin irritation + 0.6462 64.62%
Skin corrosion - 0.9582 95.82%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5596 55.96%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.5301 53.01%
skin sensitisation + 0.5247 52.47%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.7934 79.34%
Acute Oral Toxicity (c) III 0.8402 84.02%
Estrogen receptor binding + 0.7690 76.90%
Androgen receptor binding + 0.7400 74.00%
Thyroid receptor binding + 0.7200 72.00%
Glucocorticoid receptor binding + 0.8763 87.63%
Aromatase binding + 0.7167 71.67%
PPAR gamma + 0.6586 65.86%
Honey bee toxicity - 0.8433 84.33%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9975 99.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.54% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.30% 99.23%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.22% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.67% 97.09%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 86.62% 85.30%
CHEMBL340 P08684 Cytochrome P450 3A4 85.36% 91.19%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.54% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.40% 86.33%
CHEMBL2581 P07339 Cathepsin D 82.60% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 82.21% 96.09%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 80.79% 82.69%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.55% 93.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rubus fruticosus

Cross-Links

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PubChem 131752024
LOTUS LTS0247323
wikiData Q105163092