Rubiginosin B

Details

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Internal ID 5a8a2ac8-5aff-4b8c-9155-a15c8907d859
Taxonomy Organoheterocyclic compounds > Azaphilones
IUPAC Name [(6R,7R)-6-hydroxy-3-[(E)-3-hydroxyprop-1-enyl]-7-methyl-8-oxo-5,6-dihydro-1H-isochromen-7-yl] 2,4-dihydroxy-6-methylbenzoate
SMILES (Canonical) CC1=CC(=CC(=C1C(=O)OC2(C(CC3=C(C2=O)COC(=C3)C=CCO)O)C)O)O
SMILES (Isomeric) CC1=CC(=CC(=C1C(=O)O[C@@]2([C@@H](CC3=C(C2=O)COC(=C3)/C=C/CO)O)C)O)O
InChI InChI=1S/C21H22O8/c1-11-6-13(23)9-16(24)18(11)20(27)29-21(2)17(25)8-12-7-14(4-3-5-22)28-10-15(12)19(21)26/h3-4,6-7,9,17,22-25H,5,8,10H2,1-2H3/b4-3+/t17-,21-/m1/s1
InChI Key ZRJGOGLZGFEQJT-RIEYKTBPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H22O8
Molecular Weight 402.40 g/mol
Exact Mass 402.13146766 g/mol
Topological Polar Surface Area (TPSA) 134.00 Ų
XlogP 1.40
Atomic LogP (AlogP) 1.41
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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CHEMBL4080026
ZRJGOGLZGFEQJT-RIEYKTBPSA-
[(6R,7R)-6-hydroxy-3-[(E)-3-hydroxyprop-1-enyl]-7-methyl-8-oxo-5,6-dihydro-1H-isochromen-7-yl] 2,4-dihydroxy-6-methylbenzoate
InChI=1/C21H22O8/c1-11-6-13(23)9-16(24)18(11)20(27)29-21(2)17(25)8-12-7-14(4-3-5-22)28-10-15(12)19(21)26/h3-4,6-7,9,17,22-25H,5,8,10H2,1-2H3/b4-3+/t17-,21-/m1/s1

2D Structure

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2D Structure of Rubiginosin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9429 94.29%
Caco-2 - 0.7467 74.67%
Blood Brain Barrier - 0.6648 66.48%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.6813 68.13%
OATP2B1 inhibitior - 0.7167 71.67%
OATP1B1 inhibitior + 0.8595 85.95%
OATP1B3 inhibitior + 0.9176 91.76%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6814 68.14%
P-glycoprotein inhibitior - 0.5982 59.82%
P-glycoprotein substrate - 0.5947 59.47%
CYP3A4 substrate + 0.6709 67.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8611 86.11%
CYP3A4 inhibition - 0.7840 78.40%
CYP2C9 inhibition - 0.7995 79.95%
CYP2C19 inhibition - 0.7502 75.02%
CYP2D6 inhibition - 0.8641 86.41%
CYP1A2 inhibition - 0.6085 60.85%
CYP2C8 inhibition + 0.6255 62.55%
CYP inhibitory promiscuity - 0.7002 70.02%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6536 65.36%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9136 91.36%
Skin irritation - 0.7136 71.36%
Skin corrosion - 0.9394 93.94%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4633 46.33%
Micronuclear - 0.6000 60.00%
Hepatotoxicity + 0.5750 57.50%
skin sensitisation - 0.7554 75.54%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.7464 74.64%
Acute Oral Toxicity (c) III 0.5943 59.43%
Estrogen receptor binding + 0.8232 82.32%
Androgen receptor binding + 0.6729 67.29%
Thyroid receptor binding - 0.5635 56.35%
Glucocorticoid receptor binding + 0.8011 80.11%
Aromatase binding - 0.4894 48.94%
PPAR gamma + 0.6233 62.33%
Honey bee toxicity - 0.7976 79.76%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9661 96.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.02% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.90% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.69% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.60% 89.00%
CHEMBL2581 P07339 Cathepsin D 92.39% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 91.55% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.99% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.16% 100.00%
CHEMBL4208 P20618 Proteasome component C5 89.16% 90.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.90% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.82% 95.56%
CHEMBL1929 P47989 Xanthine dehydrogenase 86.35% 96.12%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.98% 99.17%
CHEMBL226 P30542 Adenosine A1 receptor 85.86% 95.93%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.74% 91.07%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.57% 96.95%
CHEMBL1937 Q92769 Histone deacetylase 2 83.29% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.35% 97.09%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 82.00% 90.24%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 81.78% 82.38%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.93% 96.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.82% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 11269635
LOTUS LTS0128112
wikiData Q75053060