Rubiarbonol B

Details

Top
Internal ID 5f6cd7d2-6f63-4d0d-8441-fb52ddbdeaa2
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1R,3S,3aS,5aS,5bS,6S,7aR,9S,11aS,13aR,13bS)-3a,5a,8,8,11a,13a-hexamethyl-3-propan-2-yl-1,2,3,4,5,5b,6,7,7a,9,10,11,13,13b-tetradecahydrocyclopenta[a]chrysene-1,6,9-triol
SMILES (Canonical) CC(C)C1CC(C2C1(CCC3(C2(CC=C4C3C(CC5C4(CCC(C5(C)C)O)C)O)C)C)C)O
SMILES (Isomeric) CC(C)[C@@H]1C[C@H]([C@H]2[C@]1(CC[C@@]3([C@@]2(CC=C4[C@H]3[C@H](C[C@@H]5[C@@]4(CC[C@@H](C5(C)C)O)C)O)C)C)C)O
InChI InChI=1S/C30H50O3/c1-17(2)19-15-21(32)25-28(19,6)13-14-29(7)24-18(9-12-30(25,29)8)27(5)11-10-23(33)26(3,4)22(27)16-20(24)31/h9,17,19-25,31-33H,10-16H2,1-8H3/t19-,20-,21+,22-,23-,24-,25-,27+,28-,29-,30+/m0/s1
InChI Key PZBGHZIQCYOWLL-YMHFVTRVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C30H50O3
Molecular Weight 458.70 g/mol
Exact Mass 458.37599545 g/mol
Topological Polar Surface Area (TPSA) 60.70 Ų
XlogP 6.30
Atomic LogP (AlogP) 5.97
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

Top
130288-60-7
(1R,3S,3aS,5aS,5bS,6S,7aR,9S,11aS,13aR,13bS)-3a,5a,8,8,11a,13a-hexamethyl-3-propan-2-yl-1,2,3,4,5,5b,6,7,7a,9,10,11,13,13b-tetradecahydrocyclopenta[a]chrysene-1,6,9-triol
(+)-Rubiarbonol B; Rubianol h
CHEMBL484022
PZBGHZIQCYOWLL-YMHFVTRVSA-
AKOS032962463
InChI=1/C30H50O3/c1-17(2)19-15-21(32)25-28(19,6)13-14-29(7)24-18(9-12-30(25,29)8)27(5)11-10-23(33)26(3,4)22(27)16-20(24)31/h9,17,19-25,31-33H,10-16H2,1-8H3/t19-,20-,21+,22-,23-,24-,25-,27+,28-,29-,30+/m0/s1

2D Structure

Top
2D Structure of Rubiarbonol B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 - 0.6009 60.09%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.6838 68.38%
OATP2B1 inhibitior - 0.8607 86.07%
OATP1B1 inhibitior + 0.9122 91.22%
OATP1B3 inhibitior + 0.9670 96.70%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5250 52.50%
BSEP inhibitior - 0.6683 66.83%
P-glycoprotein inhibitior - 0.7017 70.17%
P-glycoprotein substrate - 0.7197 71.97%
CYP3A4 substrate + 0.6320 63.20%
CYP2C9 substrate - 0.6499 64.99%
CYP2D6 substrate - 0.6843 68.43%
CYP3A4 inhibition - 0.8741 87.41%
CYP2C9 inhibition - 0.9130 91.30%
CYP2C19 inhibition - 0.8936 89.36%
CYP2D6 inhibition - 0.9460 94.60%
CYP1A2 inhibition - 0.9024 90.24%
CYP2C8 inhibition - 0.6860 68.60%
CYP inhibitory promiscuity - 0.7172 71.72%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5463 54.63%
Eye corrosion - 0.9938 99.38%
Eye irritation - 0.9458 94.58%
Skin irritation + 0.6084 60.84%
Skin corrosion - 0.9575 95.75%
Ames mutagenesis - 0.8200 82.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4466 44.66%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation + 0.4728 47.28%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.9144 91.44%
Acute Oral Toxicity (c) III 0.6265 62.65%
Estrogen receptor binding + 0.7312 73.12%
Androgen receptor binding + 0.7262 72.62%
Thyroid receptor binding + 0.6284 62.84%
Glucocorticoid receptor binding + 0.7632 76.32%
Aromatase binding + 0.7038 70.38%
PPAR gamma + 0.5251 52.51%
Honey bee toxicity - 0.8022 80.22%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9905 99.05%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.52% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.79% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.56% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.52% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.52% 100.00%
CHEMBL2581 P07339 Cathepsin D 89.91% 98.95%
CHEMBL2996 Q05655 Protein kinase C delta 89.63% 97.79%
CHEMBL226 P30542 Adenosine A1 receptor 88.73% 95.93%
CHEMBL221 P23219 Cyclooxygenase-1 88.61% 90.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.55% 94.45%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.18% 89.05%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.88% 95.56%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 87.72% 82.69%
CHEMBL1871 P10275 Androgen Receptor 85.85% 96.43%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.47% 95.89%
CHEMBL238 Q01959 Dopamine transporter 83.45% 95.88%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.69% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hydrangea chinensis
Hydrangea macrophylla
Hydrangea serrata
Rubia oncotricha
Rubia yunnanensis

Cross-Links

Top
PubChem 12019474
NPASS NPC209802
LOTUS LTS0238372
wikiData Q104391922