rubiarbonol A 3-O-beta-D-glucopyranosyl-(1->2)-beta-D-glucopyranoside

Details

Top
Internal ID b4fb5acb-d164-471b-97a2-09e55928d4db
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(1R,3S,3aR,5aS,5bS,6S,7aR,9S,11aS,13aR,13bR)-1,6-dihydroxy-3a-(hydroxymethyl)-5a,8,8,11a,13a-pentamethyl-3-propan-2-yl-1,2,3,4,5,5b,6,7,7a,9,10,11,13,13b-tetradecahydrocyclopenta[a]chrysen-9-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(C)C1CC(C2C1(CCC3(C2(CC=C4C3C(CC5C4(CCC(C5(C)C)OC6C(C(C(C(O6)CO)O)O)OC7C(C(C(C(O7)CO)O)O)O)C)O)C)C)CO)O
SMILES (Isomeric) CC(C)[C@@H]1C[C@H]([C@H]2[C@]1(CC[C@@]3([C@@]2(CC=C4[C@H]3[C@H](C[C@@H]5[C@@]4(CC[C@@H](C5(C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)O)C)C)CO)O
InChI InChI=1S/C42H70O14/c1-19(2)21-14-23(47)35-41(7)11-8-20-28(40(41,6)12-13-42(21,35)18-45)22(46)15-26-38(3,4)27(9-10-39(20,26)5)55-37-34(32(51)30(49)25(17-44)54-37)56-36-33(52)31(50)29(48)24(16-43)53-36/h8,19,21-37,43-52H,9-18H2,1-7H3/t21-,22-,23+,24+,25+,26-,27-,28-,29+,30+,31-,32-,33+,34+,35+,36-,37-,39+,40-,41+,42+/m0/s1
InChI Key DXTJWFNCSOUXFE-FFZXTACGSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C42H70O14
Molecular Weight 799.00 g/mol
Exact Mass 798.47655690 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 0.59
H-Bond Acceptor 14
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

Top
CHEBI:69511
DTXSID901100684
1338588-96-7
Q27137850
(1R,3S,3aR,5aS,5bS,6S,7aR,9S,11aS,13aR,13bR)-1,6-dihydroxy-3a-(hydroxymethyl)-5a,8,8,11a,13a-pentamethyl-3-(propan-2-yl)-2,3,3a,4,5,5a,5b,6,7,7a,8,9,10,11,11a,13,13a,13b-octadecahydro-1H-cyclopenta[a]chrysen-9-yl 2-O-beta-D-glucopyranosyl-beta-D-glucopyranoside
3beta,7beta,19alpha,28-tetrahydroxyarbor-9(11)-en-3-O-beta-D-glucopyranosyl-(1->2)-beta-D-glucopyranoside
I(2)-D-Glucopyranoside, (3I(2),7I(2),19I+/-,21I(2))-7,19-dihydroxy-17-(hydroxymethyl)-13-methyl-Aa(2)-neo-26,28-dinorgammacer-9(11)-en-3-yl 2-O-I(2)-D-glucopyranosyl-

2D Structure

Top
2D Structure of rubiarbonol A 3-O-beta-D-glucopyranosyl-(1->2)-beta-D-glucopyranoside

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7547 75.47%
Caco-2 - 0.8845 88.45%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.7664 76.64%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8352 83.52%
OATP1B3 inhibitior - 0.2571 25.71%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.7551 75.51%
P-glycoprotein inhibitior + 0.7438 74.38%
P-glycoprotein substrate - 0.5760 57.60%
CYP3A4 substrate + 0.7106 71.06%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9485 94.85%
CYP2C9 inhibition - 0.8767 87.67%
CYP2C19 inhibition - 0.9161 91.61%
CYP2D6 inhibition - 0.9371 93.71%
CYP1A2 inhibition - 0.9112 91.12%
CYP2C8 inhibition + 0.6609 66.09%
CYP inhibitory promiscuity - 0.9421 94.21%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6022 60.22%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9133 91.33%
Skin irritation - 0.5835 58.35%
Skin corrosion - 0.9447 94.47%
Ames mutagenesis - 0.7246 72.46%
Human Ether-a-go-go-Related Gene inhibition + 0.8032 80.32%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.7207 72.07%
skin sensitisation - 0.8992 89.92%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.8179 81.79%
Acute Oral Toxicity (c) III 0.5598 55.98%
Estrogen receptor binding + 0.7506 75.06%
Androgen receptor binding + 0.7585 75.85%
Thyroid receptor binding - 0.5776 57.76%
Glucocorticoid receptor binding + 0.5375 53.75%
Aromatase binding + 0.6470 64.70%
PPAR gamma + 0.7301 73.01%
Honey bee toxicity - 0.6534 65.34%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9262 92.62%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.38% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.08% 96.09%
CHEMBL2996 Q05655 Protein kinase C delta 94.88% 97.79%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.76% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 92.86% 95.93%
CHEMBL2581 P07339 Cathepsin D 91.94% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.97% 97.25%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.93% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.10% 94.45%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 88.75% 95.58%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.76% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.10% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.83% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.29% 94.00%
CHEMBL1937 Q92769 Histone deacetylase 2 83.98% 94.75%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.11% 95.83%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.70% 97.14%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.55% 100.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.17% 89.05%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.58% 95.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.29% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 56600269
NPASS NPC67469