1-(Carboxymethyl)octyl 3-((6-deoxy-alpha-L-mannopyranosyl)oxy)decanoate

Details

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Internal ID ddbd340c-436c-4672-8593-4de83af9c513
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acyl glycosides > Rhamnolipids
IUPAC Name 3-[3-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxydecanoyloxy]decanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H48O9/c1-4-6-8-10-12-14-19(16-21(27)28)34-22(29)17-20(15-13-11-9-7-5-2)35-26-25(32)24(31)23(30)18(3)33-26/h18-20,23-26,30-32H,4-17H2,1-3H3,(H,27,28)/t18-,19?,20?,23-,24+,25+,26-/m0/s1
InChI Key PPMPLIBYTIWXPG-MSJADDGSSA-N
Popularity 36 references in papers

Physical and Chemical Properties

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Molecular Formula C26H48O9
Molecular Weight 504.70 g/mol
Exact Mass 504.32983310 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 3.70
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 19

Synonyms

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37134-61-5
Rhamnopyranosyl-3-hydroxydecanoyl-3-hydroxydecanoate
1-(Carboxymethyl)octyl 3-((6-deoxy-alpha-L-mannopyranosyl)oxy)decanoate
Rhamnosyl-beta-hydroxydecanoyl-beta-hydroxydecanoate
Decanoic acid, 3-((6-deoxy-alpha-L-mannopyranosyl)oxy)-, 1-(carboxymethyl)octyl ester
RefChem:882911
609-331-0
Rphdhd
Rhamnolipid 2
Rhamnolipid R1
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1-(Carboxymethyl)octyl 3-((6-deoxy-alpha-L-mannopyranosyl)oxy)decanoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5869 58.69%
Caco-2 - 0.7727 77.27%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7800 78.00%
OATP2B1 inhibitior - 0.5690 56.90%
OATP1B1 inhibitior + 0.8865 88.65%
OATP1B3 inhibitior + 0.8977 89.77%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6858 68.58%
P-glycoprotein inhibitior - 0.5752 57.52%
P-glycoprotein substrate - 0.6600 66.00%
CYP3A4 substrate + 0.5894 58.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8949 89.49%
CYP3A4 inhibition + 0.5458 54.58%
CYP2C9 inhibition - 0.9049 90.49%
CYP2C19 inhibition - 0.7243 72.43%
CYP2D6 inhibition - 0.9123 91.23%
CYP1A2 inhibition - 0.9128 91.28%
CYP2C8 inhibition - 0.7348 73.48%
CYP inhibitory promiscuity - 0.9789 97.89%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7851 78.51%
Eye corrosion - 0.9856 98.56%
Eye irritation - 0.8733 87.33%
Skin irritation - 0.6632 66.32%
Skin corrosion - 0.9291 92.91%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5886 58.86%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.6317 63.17%
skin sensitisation - 0.8726 87.26%
Respiratory toxicity - 0.6778 67.78%
Reproductive toxicity - 0.6111 61.11%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.5921 59.21%
Estrogen receptor binding - 0.4881 48.81%
Androgen receptor binding - 0.5802 58.02%
Thyroid receptor binding - 0.6621 66.21%
Glucocorticoid receptor binding - 0.6094 60.94%
Aromatase binding + 0.5199 51.99%
PPAR gamma - 0.5920 59.20%
Honey bee toxicity - 0.9227 92.27%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.6724 67.24%
Fish aquatic toxicity + 0.9053 90.53%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.05% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.33% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.13% 99.17%
CHEMBL5255 O00206 Toll-like receptor 4 91.77% 92.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.60% 93.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.86% 91.11%
CHEMBL3776 Q14790 Caspase-8 89.09% 97.06%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.00% 92.08%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.41% 95.89%
CHEMBL221 P23219 Cyclooxygenase-1 85.42% 90.17%
CHEMBL3401 O75469 Pregnane X receptor 85.02% 94.73%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.74% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.94% 86.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.30% 100.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 83.20% 97.29%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.10% 96.47%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.00% 96.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.96% 97.21%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.17% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 162246
LOTUS LTS0067280
wikiData Q27131721