Rigidiusculamide B

Details

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Internal ID f625910e-8ede-4139-aa1b-964d74b7b8cf
Taxonomy Benzenoids > Phenols > 1-hydroxy-2-unsubstituted benzenoids
IUPAC Name (3S,5S)-3-hydroxy-5-[(4-hydroxyphenyl)methyl]-1,3-dimethylpyrrolidine-2,4-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C13H15NO4/c1-13(18)11(16)10(14(2)12(13)17)7-8-3-5-9(15)6-4-8/h3-6,10,15,18H,7H2,1-2H3/t10-,13-/m0/s1
InChI Key LSHJERGXDDEZAD-GWCFXTLKSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C13H15NO4
Molecular Weight 249.26 g/mol
Exact Mass 249.10010796 g/mol
Topological Polar Surface Area (TPSA) 77.80 Ų
XlogP 0.70
Atomic LogP (AlogP) 0.10
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 2

Synonyms

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CHEMBL1076002

2D Structure

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2D Structure of Rigidiusculamide B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6325 63.25%
Caco-2 + 0.7034 70.34%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.6895 68.95%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8494 84.94%
OATP1B3 inhibitior + 0.9423 94.23%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9044 90.44%
BSEP inhibitior - 0.8635 86.35%
P-glycoprotein inhibitior - 0.9844 98.44%
P-glycoprotein substrate - 0.7052 70.52%
CYP3A4 substrate + 0.5533 55.33%
CYP2C9 substrate - 0.6219 62.19%
CYP2D6 substrate - 0.8170 81.70%
CYP3A4 inhibition - 0.9648 96.48%
CYP2C9 inhibition - 0.8439 84.39%
CYP2C19 inhibition - 0.8664 86.64%
CYP2D6 inhibition - 0.8696 86.96%
CYP1A2 inhibition - 0.9090 90.90%
CYP2C8 inhibition - 0.7113 71.13%
CYP inhibitory promiscuity - 0.8763 87.63%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.6094 60.94%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9557 95.57%
Skin irritation - 0.7644 76.44%
Skin corrosion - 0.9186 91.86%
Ames mutagenesis - 0.5854 58.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6230 62.30%
Micronuclear + 0.6300 63.00%
Hepatotoxicity + 0.5750 57.50%
skin sensitisation - 0.8740 87.40%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.5704 57.04%
Acute Oral Toxicity (c) III 0.6598 65.98%
Estrogen receptor binding + 0.5850 58.50%
Androgen receptor binding + 0.5507 55.07%
Thyroid receptor binding - 0.5924 59.24%
Glucocorticoid receptor binding + 0.6081 60.81%
Aromatase binding + 0.6760 67.60%
PPAR gamma - 0.6342 63.42%
Honey bee toxicity - 0.9468 94.68%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity - 0.4864 48.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.81% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.57% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.10% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.98% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.75% 95.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 87.19% 90.08%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 86.91% 91.11%
CHEMBL4208 P20618 Proteasome component C5 86.53% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.49% 86.33%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 86.44% 89.67%
CHEMBL4040 P28482 MAP kinase ERK2 83.50% 83.82%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.23% 94.00%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.97% 93.40%
CHEMBL3922 P50579 Methionine aminopeptidase 2 80.57% 97.28%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.48% 85.00%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 80.27% 85.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 44614135
LOTUS LTS0182577
wikiData Q77515308