Rifamycinoside A

Details

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Internal ID 971b3ec2-b446-413f-8154-f35a140fb0c1
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (8S,9R,10S,11S,12R,13R,14R,15S,16S,17E,19E)-2,9,11,13,15-pentahydroxy-3,10,12,14,16,20-hexamethyl-8-(2-oxopropyl)-4-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-7-oxa-22-azatricyclo[21.3.1.05,26]heptacosa-1(26),2,4,17,19,23-hexaene-6,21,25,27-tetrone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H53NO16/c1-14-10-9-11-15(2)38(53)41-22-13-23(43)25-26(34(22)50)32(48)20(7)37(57-40-36(52)35(51)33(49)21(8)55-40)27(25)39(54)56-24(12-16(3)42)31(47)19(6)30(46)18(5)29(45)17(4)28(14)44/h9-11,13-14,17-19,21,24,28-31,33,35-36,40,44-49,51-52H,12H2,1-8H3,(H,41,53)/b10-9+,15-11+/t14-,17+,18+,19-,21-,24-,28-,29+,30-,31+,33-,35+,36+,40-/m0/s1
InChI Key WUHASDCWRBHQFA-FHIURUHHSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H53NO16
Molecular Weight 803.80 g/mol
Exact Mass 803.33643460 g/mol
Topological Polar Surface Area (TPSA) 287.00 Ų
XlogP 0.70
Atomic LogP (AlogP) 0.29
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

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(8S,9R,10S,11S,12R,13R,14R,15S,16S,17E,19E)-2,9,11,13,15-pentahydroxy-3,10,12,14,16,20-hexamethyl-8-(2-oxopropyl)-4-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-7-oxa-22-azatricyclo[21.3.1.05,26]heptacosa-1(26),2,4,17,19,23-hexaene-6,21,25,27-tetrone
(8S,9R,10S,11S,12R,13R,14R,15S,16S,17E,19E)-2,9,11,13,15-pentahydroxy-3,10,12,14,16,20-hexamethyl-8-(2-oxopropyl)-4-((2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl)oxy-7-oxa-22-azatricyclo(21.3.1.05,26)heptacosa-1(26),2,4,17,19,23-hexaene-6,21,25,27-tetrone
RefChem:179431
CHEBI:209428

2D Structure

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2D Structure of Rifamycinoside A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8026 80.26%
Caco-2 - 0.8771 87.71%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.4120 41.20%
OATP2B1 inhibitior - 0.6923 69.23%
OATP1B1 inhibitior + 0.7854 78.54%
OATP1B3 inhibitior + 0.9131 91.31%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior + 0.8611 86.11%
P-glycoprotein inhibitior + 0.6917 69.17%
P-glycoprotein substrate + 0.6936 69.36%
CYP3A4 substrate + 0.7077 70.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8829 88.29%
CYP3A4 inhibition - 0.8681 86.81%
CYP2C9 inhibition - 0.8085 80.85%
CYP2C19 inhibition - 0.8038 80.38%
CYP2D6 inhibition - 0.9252 92.52%
CYP1A2 inhibition - 0.8200 82.00%
CYP2C8 inhibition + 0.6831 68.31%
CYP inhibitory promiscuity - 0.7198 71.98%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.4635 46.35%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.9122 91.22%
Skin irritation - 0.7895 78.95%
Skin corrosion - 0.9396 93.96%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4738 47.38%
Micronuclear + 0.8200 82.00%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation - 0.8420 84.20%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.7559 75.59%
Acute Oral Toxicity (c) III 0.5940 59.40%
Estrogen receptor binding + 0.7979 79.79%
Androgen receptor binding + 0.6712 67.12%
Thyroid receptor binding + 0.5412 54.12%
Glucocorticoid receptor binding + 0.7129 71.29%
Aromatase binding + 0.5628 56.28%
PPAR gamma + 0.7378 73.78%
Honey bee toxicity - 0.7101 71.01%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.8697 86.97%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.04% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.47% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.15% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.03% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.71% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.97% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.77% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.38% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 91.59% 94.73%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 89.55% 95.64%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.36% 91.07%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.30% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.08% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 146683148
LOTUS LTS0276006
wikiData Q105313051