Rifamycin W-lactone

Details

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Internal ID 55718d4d-441e-4248-9226-ffa69b57a01b
Taxonomy Benzenoids > Naphthalenes > Naphthoquinones
IUPAC Name (7Z,9R,10R,11R,12S,13S,14S,15R,16S,17S,18E,20Z)-2,4,10,12,14,16-hexahydroxy-21-(hydroxymethyl)-3,7,11,13,15,17-hexamethyl-6,22,26,28-tetraoxo-23-azatricyclo[22.3.1.05,27]octacosa-1,3,5(27),7,18,20,24-heptaene-9-carbaldehyde
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C35H43NO12/c1-14-8-7-9-20(12-37)35(48)36-22-11-23(39)24-25(32(45)19(6)33(46)26(24)34(22)47)28(41)15(2)10-21(13-38)31(44)18(5)30(43)17(4)29(42)16(3)27(14)40/h7-11,13-14,16-18,21,27,29-31,37,40,42-46H,12H2,1-6H3,(H,36,48)/b8-7+,15-10-,20-9-/t14-,16+,17-,18+,21-,27-,29-,30-,31+/m0/s1
InChI Key ZGGFVIUKVFGHDO-UGAUXQCLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C35H43NO12
Molecular Weight 669.70 g/mol
Exact Mass 669.27852581 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 1.21
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Rifamycin W-lactone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9929 99.29%
Caco-2 - 0.8635 86.35%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.7151 71.51%
OATP2B1 inhibitior + 0.5800 58.00%
OATP1B1 inhibitior + 0.7615 76.15%
OATP1B3 inhibitior + 0.9328 93.28%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.9398 93.98%
P-glycoprotein inhibitior + 0.6754 67.54%
P-glycoprotein substrate + 0.6449 64.49%
CYP3A4 substrate + 0.6582 65.82%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8831 88.31%
CYP3A4 inhibition - 0.7652 76.52%
CYP2C9 inhibition - 0.7060 70.60%
CYP2C19 inhibition - 0.6308 63.08%
CYP2D6 inhibition - 0.8574 85.74%
CYP1A2 inhibition + 0.6150 61.50%
CYP2C8 inhibition + 0.4594 45.94%
CYP inhibitory promiscuity + 0.5284 52.84%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9171 91.71%
Carcinogenicity (trinary) Non-required 0.6591 65.91%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9233 92.33%
Skin irritation - 0.8088 80.88%
Skin corrosion - 0.9487 94.87%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3643 36.43%
Micronuclear + 0.8500 85.00%
Hepatotoxicity + 0.6772 67.72%
skin sensitisation - 0.8529 85.29%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.8500 85.00%
Acute Oral Toxicity (c) III 0.6588 65.88%
Estrogen receptor binding + 0.7834 78.34%
Androgen receptor binding + 0.7177 71.77%
Thyroid receptor binding + 0.5372 53.72%
Glucocorticoid receptor binding + 0.7022 70.22%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7350 73.50%
Honey bee toxicity - 0.7811 78.11%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.7937 79.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.14% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.29% 98.95%
CHEMBL1937 Q92769 Histone deacetylase 2 95.82% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.69% 95.56%
CHEMBL226 P30542 Adenosine A1 receptor 94.00% 95.93%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 90.73% 93.40%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.53% 96.09%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 89.36% 91.71%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 89.26% 83.57%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.01% 90.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.95% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.58% 99.23%
CHEMBL325 Q13547 Histone deacetylase 1 85.52% 95.92%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.18% 89.34%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 85.05% 95.64%
CHEMBL3310 Q96DB2 Histone deacetylase 11 83.18% 88.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.42% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.07% 94.45%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 81.20% 96.67%
CHEMBL4208 P20618 Proteasome component C5 80.81% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589329
LOTUS LTS0177020
wikiData Q105375154