Rhytidenone B

Details

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Internal ID 4994b210-a53f-48da-af13-8b719eabb269
Taxonomy Benzenoids > Naphthalenes
IUPAC Name (4R,4aS)-4-hydroxyspiro[2,3,4,4a,6,7-hexahydronaphthalene-5,3'-2,4-dioxatricyclo[7.3.1.05,13]trideca-1(12),5,7,9(13),10-pentaene]-1-one
SMILES (Canonical) C1CC2(C3C(CCC(=O)C3=C1)O)OC4=CC=CC5=C4C(=CC=C5)O2
SMILES (Isomeric) C1CC2([C@@H]3[C@@H](CCC(=O)C3=C1)O)OC4=CC=CC5=C4C(=CC=C5)O2
InChI InChI=1S/C20H18O4/c21-14-9-10-15(22)19-13(14)6-3-11-20(19)23-16-7-1-4-12-5-2-8-17(24-20)18(12)16/h1-2,4-8,15,19,22H,3,9-11H2/t15-,19+/m1/s1
InChI Key GVNJGLRZXITDMT-BEFAXECRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H18O4
Molecular Weight 322.40 g/mol
Exact Mass 322.12050905 g/mol
Topological Polar Surface Area (TPSA) 55.80 Ų
XlogP 3.10
Atomic LogP (AlogP) 3.37
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Rhytidenone B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9724 97.24%
Caco-2 - 0.5696 56.96%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.8395 83.95%
OATP2B1 inhibitior - 0.8619 86.19%
OATP1B1 inhibitior + 0.9462 94.62%
OATP1B3 inhibitior + 0.9423 94.23%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8071 80.71%
BSEP inhibitior + 0.6431 64.31%
P-glycoprotein inhibitior - 0.4699 46.99%
P-glycoprotein substrate - 0.8636 86.36%
CYP3A4 substrate + 0.5742 57.42%
CYP2C9 substrate - 0.7769 77.69%
CYP2D6 substrate - 0.8254 82.54%
CYP3A4 inhibition - 0.6897 68.97%
CYP2C9 inhibition - 0.8194 81.94%
CYP2C19 inhibition - 0.5944 59.44%
CYP2D6 inhibition - 0.8207 82.07%
CYP1A2 inhibition - 0.7003 70.03%
CYP2C8 inhibition - 0.5841 58.41%
CYP inhibitory promiscuity - 0.9177 91.77%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.4790 47.90%
Eye corrosion - 0.9794 97.94%
Eye irritation - 0.9335 93.35%
Skin irritation - 0.6666 66.66%
Skin corrosion - 0.9541 95.41%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6749 67.49%
Micronuclear - 0.5841 58.41%
Hepatotoxicity - 0.5070 50.70%
skin sensitisation - 0.7243 72.43%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity + 0.6894 68.94%
Acute Oral Toxicity (c) III 0.3552 35.52%
Estrogen receptor binding + 0.8742 87.42%
Androgen receptor binding + 0.6120 61.20%
Thyroid receptor binding - 0.5217 52.17%
Glucocorticoid receptor binding - 0.5473 54.73%
Aromatase binding + 0.6807 68.07%
PPAR gamma + 0.7668 76.68%
Honey bee toxicity - 0.8329 83.29%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9183 91.83%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.59% 91.11%
CHEMBL2581 P07339 Cathepsin D 92.60% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.27% 99.23%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.76% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.10% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.66% 97.09%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 86.35% 97.33%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.04% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.81% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.38% 93.04%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.19% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.40% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 82.76% 91.49%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.58% 90.71%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.52% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.05% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhinacanthus nasutus

Cross-Links

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PubChem 139585030
LOTUS LTS0032060
wikiData Q105025516