Rhmannioside a

Details

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Internal ID 66425922-b9dd-4a8f-a88a-ce145aed26b7
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name 2-(hydroxymethyl)-6-[[3,4,5-trihydroxy-6-[[5-hydroxy-2-(hydroxymethyl)-3,9-dioxatricyclo[4.4.0.02,4]dec-7-en-10-yl]oxy]oxan-2-yl]methoxy]oxane-3,4,5-triol
SMILES (Canonical) C1=COC(C2C1C(C3C2(O3)CO)O)OC4C(C(C(C(O4)COC5C(C(C(C(O5)CO)O)O)O)O)O)O
SMILES (Isomeric) C1=COC(C2C1C(C3C2(O3)CO)O)OC4C(C(C(C(O4)COC5C(C(C(C(O5)CO)O)O)O)O)O)O
InChI InChI=1S/C21H32O15/c22-3-7-11(25)13(27)15(29)19(33-7)32-4-8-12(26)14(28)16(30)20(34-8)35-18-9-6(1-2-31-18)10(24)17-21(9,5-23)36-17/h1-2,6-20,22-30H,3-5H2
InChI Key DTNSOISBYQKHCS-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H32O15
Molecular Weight 524.50 g/mol
Exact Mass 524.17412031 g/mol
Topological Polar Surface Area (TPSA) 241.00 Ų
XlogP -5.40
Atomic LogP (AlogP) -5.77
H-Bond Acceptor 15
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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rhmannioside a
81720-05-0
[(1aS,1balpha,5aalpha,6abeta)-1a,1b,2,5a,6,6a-Hexahydro-6alpha-hydroxy-1abeta-(hydroxymethyl)oxireno[4,5]cyclopenta[1,2-c]pyran-2alpha-yl]6-O-alpha-D-galactopyranosyl-beta-D-glucopyranoside
HY-N0911
CS-4171
PD065096
FT-0775850
2-(hydroxymethyl)-6-[[3,4,5-trihydroxy-6-[[5-hydroxy-2-(hydroxymethyl)-3,9-dioxatricyclo[4.4.0.0^{2,4]dec-7-en-10-yl]oxy]oxan-2-yl]methoxy]oxane-3,4,5-triol
2-(Hydroxymethyl)-6-[[3,4,5-trihydroxy-6-[[5-hydroxy-2-(hydroxymethyl)-3,9-dioxatricyclo[4.4.0.02,4]dec-7-en-10-yl]oxy]oxan-2-yl]methoxy]oxane-3,4,5-triol

2D Structure

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2D Structure of Rhmannioside a

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7320 73.20%
Caco-2 - 0.9060 90.60%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5544 55.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8589 85.89%
OATP1B3 inhibitior + 0.9582 95.82%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8497 84.97%
P-glycoprotein inhibitior - 0.6864 68.64%
P-glycoprotein substrate - 0.8161 81.61%
CYP3A4 substrate + 0.6133 61.33%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8339 83.39%
CYP3A4 inhibition - 0.9510 95.10%
CYP2C9 inhibition - 0.9133 91.33%
CYP2C19 inhibition - 0.7795 77.95%
CYP2D6 inhibition - 0.9021 90.21%
CYP1A2 inhibition - 0.8936 89.36%
CYP2C8 inhibition - 0.6182 61.82%
CYP inhibitory promiscuity - 0.8277 82.77%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5906 59.06%
Eye corrosion - 0.9882 98.82%
Eye irritation - 0.9385 93.85%
Skin irritation - 0.7993 79.93%
Skin corrosion - 0.9483 94.83%
Ames mutagenesis - 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3742 37.42%
Micronuclear - 0.7041 70.41%
Hepatotoxicity - 0.9032 90.32%
skin sensitisation - 0.8502 85.02%
Respiratory toxicity - 0.7000 70.00%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity + 0.5152 51.52%
Acute Oral Toxicity (c) III 0.3217 32.17%
Estrogen receptor binding - 0.4907 49.07%
Androgen receptor binding - 0.5527 55.27%
Thyroid receptor binding - 0.5100 51.00%
Glucocorticoid receptor binding - 0.5865 58.65%
Aromatase binding + 0.7230 72.30%
PPAR gamma + 0.6398 63.98%
Honey bee toxicity - 0.7548 75.48%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity - 0.6525 65.25%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.72% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.46% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.91% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 89.64% 95.93%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.57% 86.92%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 85.97% 83.57%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.90% 97.25%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 84.55% 92.32%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.08% 97.09%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.50% 96.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.43% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 81.78% 94.73%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.99% 94.62%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.51% 95.83%
CHEMBL221 P23219 Cyclooxygenase-1 80.12% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rehmannia glutinosa

Cross-Links

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PubChem 78407230
NPASS NPC6248