Rhabdopeptide 1

Details

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Internal ID cbc9e663-3613-425d-8c3d-d4ab338bd805
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides
IUPAC Name (2R)-N,4-dimethyl-2-(methylamino)-N-[(2R)-3-methyl-1-[[(2R)-3-methyl-1-[methyl-[(2R)-3-methyl-1-oxo-1-(2-phenylethylamino)butan-2-yl]amino]-1-oxobutan-2-yl]amino]-1-oxobutan-2-yl]pentanamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C32H55N5O4/c1-20(2)19-25(33-9)31(40)36(10)28(23(7)8)30(39)35-26(21(3)4)32(41)37(11)27(22(5)6)29(38)34-18-17-24-15-13-12-14-16-24/h12-16,20-23,25-28,33H,17-19H2,1-11H3,(H,34,38)(H,35,39)/t25-,26-,27-,28-/m1/s1
InChI Key CKNBFSIURUOKMN-BIYDSLDMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C32H55N5O4
Molecular Weight 573.80 g/mol
Exact Mass 573.42540525 g/mol
Topological Polar Surface Area (TPSA) 111.00 Ų
XlogP 5.30
Atomic LogP (AlogP) 3.09
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Rhabdopeptide 1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8853 88.53%
Caco-2 - 0.7872 78.72%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability + 0.5857 58.57%
Subcellular localzation Lysosomes 0.4167 41.67%
OATP2B1 inhibitior - 0.5724 57.24%
OATP1B1 inhibitior + 0.8915 89.15%
OATP1B3 inhibitior + 0.9416 94.16%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.6617 66.17%
P-glycoprotein inhibitior + 0.7153 71.53%
P-glycoprotein substrate + 0.8880 88.80%
CYP3A4 substrate + 0.6114 61.14%
CYP2C9 substrate - 0.7907 79.07%
CYP2D6 substrate - 0.7343 73.43%
CYP3A4 inhibition - 0.8132 81.32%
CYP2C9 inhibition - 0.9046 90.46%
CYP2C19 inhibition - 0.7013 70.13%
CYP2D6 inhibition - 0.9453 94.53%
CYP1A2 inhibition - 0.9244 92.44%
CYP2C8 inhibition - 0.7590 75.90%
CYP inhibitory promiscuity - 0.9690 96.90%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7400 74.00%
Carcinogenicity (trinary) Non-required 0.7137 71.37%
Eye corrosion - 0.9816 98.16%
Eye irritation - 0.9402 94.02%
Skin irritation - 0.8033 80.33%
Skin corrosion - 0.9107 91.07%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3746 37.46%
Micronuclear + 0.5200 52.00%
Hepatotoxicity + 0.5334 53.34%
skin sensitisation - 0.8661 86.61%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.8413 84.13%
Acute Oral Toxicity (c) III 0.6720 67.20%
Estrogen receptor binding + 0.6626 66.26%
Androgen receptor binding + 0.6403 64.03%
Thyroid receptor binding + 0.5923 59.23%
Glucocorticoid receptor binding + 0.6543 65.43%
Aromatase binding + 0.5935 59.35%
PPAR gamma + 0.6678 66.78%
Honey bee toxicity - 0.8439 84.39%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.4319 43.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.81% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 98.49% 90.17%
CHEMBL3837 P07711 Cathepsin L 97.21% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.15% 96.09%
CHEMBL268 P43235 Cathepsin K 93.83% 96.85%
CHEMBL3492 P49721 Proteasome Macropain subunit 93.39% 90.24%
CHEMBL4072 P07858 Cathepsin B 92.32% 93.67%
CHEMBL4208 P20618 Proteasome component C5 90.09% 90.00%
CHEMBL5028 O14672 ADAM10 89.43% 97.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.42% 93.56%
CHEMBL5261 Q7L7X3 Serine/threonine-protein kinase TAO1 88.83% 89.33%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 88.15% 98.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.01% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.00% 95.56%
CHEMBL5701 Q9H2K8 Serine/threonine-protein kinase TAO3 87.03% 96.67%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 86.52% 100.00%
CHEMBL2885 P07451 Carbonic anhydrase III 84.53% 87.45%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 84.52% 96.37%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.81% 95.89%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.91% 100.00%
CHEMBL3308 P55212 Caspase-6 82.49% 97.56%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.39% 95.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.75% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 73332068
LOTUS LTS0013898
wikiData Q104962544