Rha(a1-2)Rha(a1-3)Rha2Ac(a1-3)[Glc(a1-6)]b-GlcNAc

Details

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Internal ID f5914da6-5fe6-4946-8c4e-659b195db660
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Oligosaccharides
IUPAC Name [(2S,3R,4R,5S,6S)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-dihydroxy-6-[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-4-yl]oxy-4-[(2S,3R,4R,5R,6S)-4,5-dihydroxy-6-methyl-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-methyloxan-3-yl] acetate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3OC(=O)C)OC4C(C(OC(C4O)COC5C(C(C(C(O5)CO)O)O)O)O)NC(=O)C)C)O)C)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@@H]([C@H]([C@@H](O[C@H]2O[C@@H]3[C@H]([C@@H](O[C@H]([C@@H]3OC(=O)C)O[C@@H]4[C@H]([C@@H](O[C@@H]([C@H]4O)CO[C@@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)NC(=O)C)C)O)C)O)O)O)O)O
InChI InChI=1S/C34H57NO24/c1-8-16(39)21(44)25(48)32(51-8)59-28-23(46)17(40)9(2)52-33(28)58-27-18(41)10(3)53-34(29(27)54-12(5)38)57-26-15(35-11(4)37)30(49)55-14(20(26)43)7-50-31-24(47)22(45)19(42)13(6-36)56-31/h8-10,13-34,36,39-49H,6-7H2,1-5H3,(H,35,37)/t8-,9-,10-,13+,14+,15+,16-,17-,18-,19+,20+,21+,22-,23+,24+,25+,26+,27+,28+,29+,30+,31-,32-,33-,34-/m0/s1
InChI Key DJZCBZKPDQTJKA-CBPQZIGVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C34H57NO24
Molecular Weight 863.80 g/mol
Exact Mass 863.32705168 g/mol
Topological Polar Surface Area (TPSA) 381.00 Ų
XlogP -7.40
Atomic LogP (AlogP) -8.13
H-Bond Acceptor 24
H-Bond Donor 13
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Rha(a1-2)Rha(a1-3)Rha2Ac(a1-3)[Glc(a1-6)]b-GlcNAc

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9880 98.80%
Caco-2 - 0.8772 87.72%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.5860 58.60%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7093 70.93%
OATP1B3 inhibitior + 0.9406 94.06%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7134 71.34%
P-glycoprotein inhibitior + 0.6591 65.91%
P-glycoprotein substrate - 0.6639 66.39%
CYP3A4 substrate + 0.6534 65.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8773 87.73%
CYP3A4 inhibition - 0.9134 91.34%
CYP2C9 inhibition - 0.9174 91.74%
CYP2C19 inhibition - 0.9350 93.50%
CYP2D6 inhibition - 0.9403 94.03%
CYP1A2 inhibition - 0.9602 96.02%
CYP2C8 inhibition - 0.6396 63.96%
CYP inhibitory promiscuity - 0.8702 87.02%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6573 65.73%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.9104 91.04%
Skin irritation - 0.8441 84.41%
Skin corrosion - 0.9595 95.95%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7597 75.97%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.6893 68.93%
skin sensitisation - 0.9066 90.66%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.6388 63.88%
Acute Oral Toxicity (c) III 0.5577 55.77%
Estrogen receptor binding + 0.7203 72.03%
Androgen receptor binding - 0.5967 59.67%
Thyroid receptor binding - 0.5269 52.69%
Glucocorticoid receptor binding + 0.5826 58.26%
Aromatase binding + 0.5412 54.12%
PPAR gamma + 0.6473 64.73%
Honey bee toxicity - 0.6772 67.72%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity - 0.8713 87.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.06% 91.11%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 94.81% 81.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.30% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.90% 97.36%
CHEMBL3401 O75469 Pregnane X receptor 89.53% 94.73%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.28% 85.14%
CHEMBL2581 P07339 Cathepsin D 89.09% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.73% 99.17%
CHEMBL5255 O00206 Toll-like receptor 4 86.04% 92.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 85.70% 94.33%
CHEMBL226 P30542 Adenosine A1 receptor 84.91% 95.93%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 84.42% 87.67%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.63% 96.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.25% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.71% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.89% 95.83%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.87% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 162898383
LOTUS LTS0049156
wikiData Q104982921