Repenin D

Details

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Internal ID cc45c3c2-01e8-4466-9e24-5c2ca0babb7c
Taxonomy Lignans, neolignans and related compounds > Coumarinolignans
IUPAC Name [(2R,3R)-3-(4-hydroxy-3,5-dimethoxyphenyl)-5-methoxy-9-oxo-2,3-dihydropyrano[3,2-h][1,4]benzodioxin-2-yl]methyl 3,4-dihydroxybenzoate
SMILES (Canonical) COC1=CC(=CC(=C1O)OC)C2C(OC3=C4C(=CC(=C3O2)OC)C=CC(=O)O4)COC(=O)C5=CC(=C(C=C5)O)O
SMILES (Isomeric) COC1=CC(=CC(=C1O)OC)[C@@H]2[C@H](OC3=C4C(=CC(=C3O2)OC)C=CC(=O)O4)COC(=O)C5=CC(=C(C=C5)O)O
InChI InChI=1S/C28H24O12/c1-34-18-10-15(11-19(35-2)23(18)32)24-21(12-37-28(33)14-4-6-16(29)17(30)8-14)38-27-25-13(5-7-22(31)39-25)9-20(36-3)26(27)40-24/h4-11,21,24,29-30,32H,12H2,1-3H3/t21-,24-/m1/s1
InChI Key WQIZCXIRVAHPRD-ZJSXRUAMSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H24O12
Molecular Weight 552.50 g/mol
Exact Mass 552.12677620 g/mol
Topological Polar Surface Area (TPSA) 159.00 Ų
XlogP 3.60
Atomic LogP (AlogP) 3.67
H-Bond Acceptor 12
H-Bond Donor 3
Rotatable Bonds 7

Synonyms

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CHEMBL502250

2D Structure

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2D Structure of Repenin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7779 77.79%
Caco-2 - 0.7882 78.82%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.8183 81.83%
OATP2B1 inhibitior - 0.8590 85.90%
OATP1B1 inhibitior + 0.8046 80.46%
OATP1B3 inhibitior - 0.3163 31.63%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9195 91.95%
P-glycoprotein inhibitior + 0.8617 86.17%
P-glycoprotein substrate - 0.6340 63.40%
CYP3A4 substrate + 0.5969 59.69%
CYP2C9 substrate - 0.8249 82.49%
CYP2D6 substrate - 0.8304 83.04%
CYP3A4 inhibition - 0.9397 93.97%
CYP2C9 inhibition - 0.8335 83.35%
CYP2C19 inhibition - 0.9116 91.16%
CYP2D6 inhibition - 0.9535 95.35%
CYP1A2 inhibition - 0.9371 93.71%
CYP2C8 inhibition + 0.7801 78.01%
CYP inhibitory promiscuity - 0.8107 81.07%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6768 67.68%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.8739 87.39%
Skin irritation - 0.8726 87.26%
Skin corrosion - 0.9677 96.77%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7612 76.12%
Micronuclear + 0.7392 73.92%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.9273 92.73%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.9250 92.50%
Acute Oral Toxicity (c) III 0.6954 69.54%
Estrogen receptor binding + 0.8797 87.97%
Androgen receptor binding + 0.8475 84.75%
Thyroid receptor binding + 0.6104 61.04%
Glucocorticoid receptor binding + 0.8455 84.55%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6730 67.30%
Honey bee toxicity - 0.8332 83.32%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9011 90.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.39% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.53% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.21% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.12% 94.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.04% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.29% 86.33%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 86.74% 80.78%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.41% 92.62%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.73% 96.09%
CHEMBL2535 P11166 Glucose transporter 85.66% 98.75%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.59% 96.95%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 84.88% 97.21%
CHEMBL4208 P20618 Proteasome component C5 84.76% 90.00%
CHEMBL2581 P07339 Cathepsin D 84.64% 98.95%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 84.48% 94.42%
CHEMBL3192 Q9BY41 Histone deacetylase 8 83.65% 93.99%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.46% 95.56%
CHEMBL3194 P02766 Transthyretin 83.06% 90.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.17% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.08% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Duranta erecta

Cross-Links

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PubChem 44583461
LOTUS LTS0156782
wikiData Q105310749