Repenin B

Details

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Internal ID 0f24ab27-796d-4a09-958c-4e5da83ffb2d
Taxonomy Lignans, neolignans and related compounds > Coumarinolignans
IUPAC Name [(2R,3R)-3-(4-hydroxy-3-methoxyphenyl)-5-methoxy-9-oxo-2,3-dihydropyrano[3,2-h][1,4]benzodioxin-2-yl]methyl (E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate
SMILES (Canonical) COC1=C(C=CC(=C1)C=CC(=O)OCC2C(OC3=C(C=C4C=CC(=O)OC4=C3O2)OC)C5=CC(=C(C=C5)O)OC)O
SMILES (Isomeric) COC1=C(C=CC(=C1)/C=C/C(=O)OC[C@@H]2[C@H](OC3=C(C=C4C=CC(=O)OC4=C3O2)OC)C5=CC(=C(C=C5)O)OC)O
InChI InChI=1S/C30H26O11/c1-35-21-12-16(4-8-19(21)31)5-10-25(33)38-15-24-27(17-6-9-20(32)22(13-17)36-2)41-29-23(37-3)14-18-7-11-26(34)40-28(18)30(29)39-24/h4-14,24,27,31-32H,15H2,1-3H3/b10-5+/t24-,27-/m1/s1
InChI Key RDPYGDKKJMTRLB-KTRJKXECSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H26O11
Molecular Weight 562.50 g/mol
Exact Mass 562.14751164 g/mol
Topological Polar Surface Area (TPSA) 139.00 Ų
XlogP 4.40
Atomic LogP (AlogP) 4.37
H-Bond Acceptor 11
H-Bond Donor 2
Rotatable Bonds 8

Synonyms

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CHEMBL452452

2D Structure

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2D Structure of Repenin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9210 92.10%
Caco-2 - 0.7980 79.80%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7754 77.54%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8625 86.25%
OATP1B3 inhibitior - 0.4140 41.40%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9855 98.55%
P-glycoprotein inhibitior + 0.8793 87.93%
P-glycoprotein substrate - 0.7338 73.38%
CYP3A4 substrate + 0.6014 60.14%
CYP2C9 substrate - 0.8119 81.19%
CYP2D6 substrate - 0.8532 85.32%
CYP3A4 inhibition - 0.8483 84.83%
CYP2C9 inhibition - 0.6145 61.45%
CYP2C19 inhibition - 0.8357 83.57%
CYP2D6 inhibition - 0.9013 90.13%
CYP1A2 inhibition - 0.9548 95.48%
CYP2C8 inhibition + 0.7428 74.28%
CYP inhibitory promiscuity - 0.5080 50.80%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5754 57.54%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.8874 88.74%
Skin irritation - 0.8599 85.99%
Skin corrosion - 0.9695 96.95%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8287 82.87%
Micronuclear + 0.7392 73.92%
Hepatotoxicity - 0.7250 72.50%
skin sensitisation - 0.8777 87.77%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.9343 93.43%
Acute Oral Toxicity (c) III 0.5732 57.32%
Estrogen receptor binding + 0.8512 85.12%
Androgen receptor binding + 0.8534 85.34%
Thyroid receptor binding + 0.6936 69.36%
Glucocorticoid receptor binding + 0.8804 88.04%
Aromatase binding - 0.4911 49.11%
PPAR gamma + 0.7588 75.88%
Honey bee toxicity - 0.8129 81.29%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9501 95.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.81% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.43% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 94.03% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.58% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.68% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.08% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.62% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.97% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.34% 99.17%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 87.85% 80.78%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.79% 99.23%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 87.21% 96.95%
CHEMBL3194 P02766 Transthyretin 86.33% 90.71%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.59% 86.92%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.58% 92.62%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.88% 94.45%
CHEMBL2535 P11166 Glucose transporter 81.78% 98.75%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.64% 89.62%
CHEMBL1951 P21397 Monoamine oxidase A 81.52% 91.49%
CHEMBL3401 O75469 Pregnane X receptor 80.11% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Duranta erecta

Cross-Links

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PubChem 44511362
LOTUS LTS0121002
wikiData Q105234387