Pyrrocidine B

Details

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Internal ID 574cedda-2cc1-4083-b9e9-24d77179eeb1
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Eicosanoids > Prostaglandins and related compounds
IUPAC Name (3S,4R,5S,7R,9S,10R,13R,14S,16S,19S,27S)-13-ethenyl-19-hydroxy-5,7,9,11-tetramethyl-2-oxa-18-azahexacyclo[19.2.2.13,10.116,19.04,9.014,27]heptacosa-1(24),11,21(25),22-tetraene-15,17-dione
SMILES (Canonical) CC1CC(C2C3C4C(C(C=C(C4C2(C1)C)C)C=C)C(=O)C5CC(CC6=CC=C(O3)C=C6)(NC5=O)O)C
SMILES (Isomeric) C[C@@H]1C[C@@H]([C@H]2[C@@H]3[C@@H]4[C@H]([C@@H](C=C([C@@H]4[C@@]2(C1)C)C)C=C)C(=O)[C@@H]5C[C@](CC6=CC=C(O3)C=C6)(NC5=O)O)C
InChI InChI=1S/C31H39NO4/c1-6-20-12-18(4)25-24-23(20)27(33)22-15-31(35,32-29(22)34)14-19-7-9-21(10-8-19)36-28(24)26-17(3)11-16(2)13-30(25,26)5/h6-10,12,16-17,20,22-26,28,35H,1,11,13-15H2,2-5H3,(H,32,34)/t16-,17+,20-,22+,23+,24-,25+,26+,28+,30+,31-/m1/s1
InChI Key OCUONUXNKYDHKY-PZBKSWHFSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C31H39NO4
Molecular Weight 489.60 g/mol
Exact Mass 489.28790873 g/mol
Topological Polar Surface Area (TPSA) 75.60 Ų
XlogP 5.50
Atomic LogP (AlogP) 4.70
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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CHEMBL486118
SCHEMBL18105236
(3S,4R,5S,7R,9S,10R,13R,14S,16S,19S,27S)-13-ethenyl-19-hydroxy-5,7,9,11-tetramethyl-2-oxa-18-azahexacyclo[19.2.2.13,10.116,19.04,9.014,27]heptacosa-1(24),11,21(25),22-tetraene-15,17-dione

2D Structure

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2D Structure of Pyrrocidine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9965 99.65%
Caco-2 - 0.6364 63.64%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.5054 50.54%
OATP2B1 inhibitior - 0.8605 86.05%
OATP1B1 inhibitior + 0.8704 87.04%
OATP1B3 inhibitior + 0.9218 92.18%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8065 80.65%
P-glycoprotein inhibitior + 0.7151 71.51%
P-glycoprotein substrate + 0.5892 58.92%
CYP3A4 substrate + 0.6928 69.28%
CYP2C9 substrate - 0.6043 60.43%
CYP2D6 substrate - 0.8071 80.71%
CYP3A4 inhibition - 0.8255 82.55%
CYP2C9 inhibition - 0.7329 73.29%
CYP2C19 inhibition - 0.7798 77.98%
CYP2D6 inhibition - 0.9098 90.98%
CYP1A2 inhibition - 0.8404 84.04%
CYP2C8 inhibition + 0.4608 46.08%
CYP inhibitory promiscuity - 0.7782 77.82%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.4063 40.63%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9665 96.65%
Skin irritation - 0.7673 76.73%
Skin corrosion - 0.9295 92.95%
Ames mutagenesis + 0.5217 52.17%
Human Ether-a-go-go-Related Gene inhibition - 0.4484 44.84%
Micronuclear + 0.7200 72.00%
Hepatotoxicity + 0.6677 66.77%
skin sensitisation - 0.8092 80.92%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity + 0.6229 62.29%
Acute Oral Toxicity (c) III 0.4569 45.69%
Estrogen receptor binding + 0.6686 66.86%
Androgen receptor binding + 0.7306 73.06%
Thyroid receptor binding + 0.5854 58.54%
Glucocorticoid receptor binding + 0.7499 74.99%
Aromatase binding + 0.7060 70.60%
PPAR gamma + 0.6592 65.92%
Honey bee toxicity - 0.7315 73.15%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9392 93.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.10% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.83% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.49% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.40% 95.56%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 91.06% 85.30%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.71% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.75% 97.09%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 89.62% 86.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.77% 99.23%
CHEMBL1937 Q92769 Histone deacetylase 2 88.29% 94.75%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 87.61% 93.40%
CHEMBL4530 P00488 Coagulation factor XIII 87.59% 96.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.87% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.75% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.30% 89.00%
CHEMBL3310 Q96DB2 Histone deacetylase 11 86.23% 88.56%
CHEMBL4208 P20618 Proteasome component C5 85.30% 90.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.47% 95.50%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 80.69% 95.48%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10929061
LOTUS LTS0190600
wikiData Q77374785