Pyropheophorbide a

Details

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Internal ID 6ccf82c7-8466-4a25-a787-0cac51356136
Taxonomy Organoheterocyclic compounds > Tetrapyrroles and derivatives
IUPAC Name 3-[(21S,22S)-16-ethenyl-11-ethyl-4-hydroxy-12,17,21,26-tetramethyl-7,23,24,25-tetrazahexacyclo[18.2.1.15,8.110,13.115,18.02,6]hexacosa-1,4,6,8(26),9,11,13(25),14,16,18(24),19-undecaen-22-yl]propanoic acid
SMILES (Canonical) CCC1=C(C2=NC1=CC3=C(C4=C(CC(=C5C(C(C(=CC6=NC(=C2)C(=C6C)C=C)N5)C)CCC(=O)O)C4=N3)O)C)C
SMILES (Isomeric) CCC1=C(C2=NC1=CC3=C(C4=C(CC(=C5[C@H]([C@@H](C(=CC6=NC(=C2)C(=C6C)C=C)N5)C)CCC(=O)O)C4=N3)O)C)C
InChI InChI=1S/C33H34N4O3/c1-7-19-15(3)23-12-25-17(5)21(9-10-30(39)40)32(36-25)22-11-29(38)31-18(6)26(37-33(22)31)14-28-20(8-2)16(4)24(35-28)13-27(19)34-23/h7,12-14,17,21,36,38H,1,8-11H2,2-6H3,(H,39,40)/t17-,21-/m0/s1
InChI Key FDKRLXBXYZKWRZ-UWJYYQICSA-N
Popularity 113 references in papers

Physical and Chemical Properties

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Molecular Formula C33H34N4O3
Molecular Weight 534.60 g/mol
Exact Mass 534.26309096 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 6.71
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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Pyropheophorbide-a
24533-72-0
PYROPHEOPHORBIDE
CHEBI:48398
3-[(21S,22S)-16-ethenyl-11-ethyl-4-hydroxy-12,17,21,26-tetramethyl-7,23,24,25-tetrazahexacyclo[18.2.1.15,8.110,13.115,18.02,6]hexacosa-1,4,6,8(26),9,11,13(25),14,16,18(24),19-undecaen-22-yl]propanoic acid
(3S-trans)-9-ethenyl-14-ethyl-4,8,13,18-tetramethyl-20-oxo-3-phorbinepropanoic acid
3-[(3S,4S)-14-ethyl-4,8,13,18-tetramethyl-20-oxo-9-vinylphorbin-3-yl]propanoic acid
3-Phorbinepropanoic acid, 9-ethenyl-14-ethyl-4,8,13,18-tetramethyl-20-oxo-, (3S,4S)-
Pyropheophorbide alpha
PpaPpa
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Pyropheophorbide a

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9842 98.42%
Caco-2 - 0.8270 82.70%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7012 70.12%
OATP2B1 inhibitior + 0.5712 57.12%
OATP1B1 inhibitior + 0.8052 80.52%
OATP1B3 inhibitior + 0.9277 92.77%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9533 95.33%
P-glycoprotein inhibitior + 0.7318 73.18%
P-glycoprotein substrate + 0.6457 64.57%
CYP3A4 substrate + 0.6768 67.68%
CYP2C9 substrate - 0.5915 59.15%
CYP2D6 substrate - 0.8504 85.04%
CYP3A4 inhibition - 0.8428 84.28%
CYP2C9 inhibition - 0.6012 60.12%
CYP2C19 inhibition - 0.7359 73.59%
CYP2D6 inhibition - 0.8433 84.33%
CYP1A2 inhibition + 0.5190 51.90%
CYP2C8 inhibition + 0.6559 65.59%
CYP inhibitory promiscuity - 0.6451 64.51%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5294 52.94%
Eye corrosion - 0.9818 98.18%
Eye irritation - 0.9235 92.35%
Skin irritation - 0.7243 72.43%
Skin corrosion - 0.9051 90.51%
Ames mutagenesis - 0.6908 69.08%
Human Ether-a-go-go-Related Gene inhibition + 0.6457 64.57%
Micronuclear + 0.5300 53.00%
Hepatotoxicity - 0.5073 50.73%
skin sensitisation - 0.7895 78.95%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.9326 93.26%
Acute Oral Toxicity (c) III 0.5421 54.21%
Estrogen receptor binding + 0.8545 85.45%
Androgen receptor binding + 0.7485 74.85%
Thyroid receptor binding + 0.6862 68.62%
Glucocorticoid receptor binding + 0.7375 73.75%
Aromatase binding + 0.7192 71.92%
PPAR gamma + 0.6618 66.18%
Honey bee toxicity - 0.8267 82.67%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.8797 87.97%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.01% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 96.69% 90.17%
CHEMBL2581 P07339 Cathepsin D 96.03% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.30% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.96% 91.11%
CHEMBL202 P00374 Dihydrofolate reductase 92.00% 89.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.82% 94.45%
CHEMBL230 P35354 Cyclooxygenase-2 84.98% 89.63%
CHEMBL1937 Q92769 Histone deacetylase 2 84.15% 94.75%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.41% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.48% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.32% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.21% 97.09%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.01% 96.90%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.29% 96.00%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.94% 94.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Citrus japonica
Palicourea acuminata

Cross-Links

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PubChem 161456
LOTUS LTS0140228
wikiData Q104402166