Pyrimidine

Details

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Internal ID 15e1cd49-0f36-4f7f-9144-9bd9b273ed69
Taxonomy Organoheterocyclic compounds > Diazines > Pyrimidines and pyrimidine derivatives
IUPAC Name pyrimidine
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H
InChI Key CZPWVGJYEJSRLH-UHFFFAOYSA-N
Popularity 37,701 references in papers

Physical and Chemical Properties

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Molecular Formula C4H4N2
Molecular Weight 80.09 g/mol
Exact Mass 80.037448136 g/mol
Topological Polar Surface Area (TPSA) 25.80 Ų
XlogP -0.40
Atomic LogP (AlogP) 0.48
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 0

Synonyms

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289-95-2
1,3-Diazine
Metadiazine
m-Diazine
1,3-Diazabenzene
Miazine
Pyrimidine base
pyrimidin
1,3-Diazin
CHEBI:16898
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Pyrimidine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9852 98.52%
Caco-2 + 0.7795 77.95%
Blood Brain Barrier + 1.0000 100.00%
Human oral bioavailability + 0.8857 88.57%
Subcellular localzation Mitochondria 0.7182 71.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9807 98.07%
OATP1B3 inhibitior + 0.9609 96.09%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9061 90.61%
P-glycoprotein inhibitior - 0.9890 98.90%
P-glycoprotein substrate - 0.9939 99.39%
CYP3A4 substrate - 0.8440 84.40%
CYP2C9 substrate - 0.8019 80.19%
CYP2D6 substrate - 0.7743 77.43%
CYP3A4 inhibition - 0.7148 71.48%
CYP2C9 inhibition - 0.9355 93.55%
CYP2C19 inhibition - 0.9645 96.45%
CYP2D6 inhibition - 0.9685 96.85%
CYP1A2 inhibition - 0.5322 53.22%
CYP2C8 inhibition - 0.9621 96.21%
CYP inhibitory promiscuity - 0.7643 76.43%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8100 81.00%
Carcinogenicity (trinary) Non-required 0.5136 51.36%
Eye corrosion + 0.6515 65.15%
Eye irritation + 0.9963 99.63%
Skin irritation + 0.9048 90.48%
Skin corrosion + 0.8872 88.72%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7532 75.32%
Micronuclear - 0.5300 53.00%
Hepatotoxicity + 0.9000 90.00%
skin sensitisation + 0.6879 68.79%
Respiratory toxicity - 0.8667 86.67%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity - 0.6750 67.50%
Nephrotoxicity + 0.6258 62.58%
Acute Oral Toxicity (c) III 0.5154 51.54%
Estrogen receptor binding - 0.9172 91.72%
Androgen receptor binding - 0.8082 80.82%
Thyroid receptor binding - 0.8228 82.28%
Glucocorticoid receptor binding - 0.8646 86.46%
Aromatase binding - 0.8741 87.41%
PPAR gamma - 0.8981 89.81%
Honey bee toxicity - 0.8979 89.79%
Biodegradation + 0.6000 60.00%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity - 0.9028 90.28%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
No predicted targets yet!

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9260
LOTUS LTS0089124
wikiData Q207722