Pyragonicin

Details

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Internal ID 5811887d-1eaf-4675-9d1f-7f0f4e8e8d24
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty alcohols > Annonaceous acetogenins
IUPAC Name (2S)-2-methyl-4-[(2R,8R,11R)-2,8,11-trihydroxy-11-[(2R,5R,6R)-5-hydroxy-6-tetradecyloxan-2-yl]undecyl]-2H-furan-5-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C35H64O7/c1-3-4-5-6-7-8-9-10-11-12-13-17-20-33-32(39)23-24-34(42-33)31(38)22-21-29(36)18-15-14-16-19-30(37)26-28-25-27(2)41-35(28)40/h25,27,29-34,36-39H,3-24,26H2,1-2H3/t27-,29+,30+,31+,32+,33+,34+/m0/s1
InChI Key XLDSTCJDEYZOKR-CGWDHHCXSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C35H64O7
Molecular Weight 596.90 g/mol
Exact Mass 596.46520438 g/mol
Topological Polar Surface Area (TPSA) 116.00 Ų
XlogP 8.80
Atomic LogP (AlogP) 7.06
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 25

Synonyms

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(2S)-2-methyl-4-((2R,8R,11R)-2,8,11-trihydroxy-11-((2R,5R,6R)-5-hydroxy-6-tetradecyloxan-2-yl)undecyl)-2H-furan-5-one
(2S)-2-methyl-4-[(2R,8R,11R)-2,8,11-trihydroxy-11-[(2R,5R,6R)-5-hydroxy-6-tetradecyloxan-2-yl]undecyl]-2H-furan-5-one
RefChem:177399
CHEMBL448093
SCHEMBL29930831

2D Structure

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2D Structure of Pyragonicin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9563 95.63%
Caco-2 - 0.8419 84.19%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8290 82.90%
OATP2B1 inhibitior - 0.5665 56.65%
OATP1B1 inhibitior + 0.8587 85.87%
OATP1B3 inhibitior + 0.9302 93.02%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7570 75.70%
BSEP inhibitior - 0.4774 47.74%
P-glycoprotein inhibitior + 0.5722 57.22%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6510 65.10%
CYP2C9 substrate - 0.6043 60.43%
CYP2D6 substrate - 0.8694 86.94%
CYP3A4 inhibition - 0.6553 65.53%
CYP2C9 inhibition - 0.9065 90.65%
CYP2C19 inhibition - 0.7434 74.34%
CYP2D6 inhibition - 0.8841 88.41%
CYP1A2 inhibition - 0.8509 85.09%
CYP2C8 inhibition - 0.7121 71.21%
CYP inhibitory promiscuity - 0.8437 84.37%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6368 63.68%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.8735 87.35%
Skin irritation - 0.5524 55.24%
Skin corrosion - 0.9245 92.45%
Ames mutagenesis - 0.6915 69.15%
Human Ether-a-go-go-Related Gene inhibition - 0.4651 46.51%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.5217 52.17%
skin sensitisation - 0.8110 81.10%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.7099 70.99%
Acute Oral Toxicity (c) III 0.4541 45.41%
Estrogen receptor binding + 0.7265 72.65%
Androgen receptor binding + 0.5222 52.22%
Thyroid receptor binding - 0.6527 65.27%
Glucocorticoid receptor binding - 0.5761 57.61%
Aromatase binding + 0.5660 56.60%
PPAR gamma - 0.5287 52.87%
Honey bee toxicity - 0.9073 90.73%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity + 0.6203 62.03%
Fish aquatic toxicity + 0.9685 96.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.31% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.22% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.55% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.54% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.57% 91.11%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 90.25% 85.94%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.94% 95.56%
CHEMBL4040 P28482 MAP kinase ERK2 88.46% 83.82%
CHEMBL3401 O75469 Pregnane X receptor 88.09% 94.73%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 87.72% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.61% 99.17%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 87.11% 92.88%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 86.78% 92.08%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 85.03% 90.71%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.89% 93.56%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 84.71% 97.29%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.24% 97.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.62% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.48% 96.61%
CHEMBL2996 Q05655 Protein kinase C delta 81.90% 97.79%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 81.44% 91.81%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.02% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.22% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.17% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Goniothalamus giganteus

Cross-Links

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PubChem 10393745
NPASS NPC47937
LOTUS LTS0228936
wikiData Q105329910