Pygmeine

Details

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Internal ID c1697e57-f524-49cc-b16f-b6f5df489afb
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Glutamine and derivatives
IUPAC Name (2S)-2-amino-5-[2-(2-hydroxyphenyl)hydrazinyl]-5-oxopentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C11H15N3O4/c12-7(11(17)18)5-6-10(16)14-13-8-3-1-2-4-9(8)15/h1-4,7,13,15H,5-6,12H2,(H,14,16)(H,17,18)/t7-/m0/s1
InChI Key CRSVHQICRXRCEP-ZETCQYMHSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C11H15N3O4
Molecular Weight 253.25 g/mol
Exact Mass 253.10625597 g/mol
Topological Polar Surface Area (TPSA) 125.00 Ų
XlogP -1.70
Atomic LogP (AlogP) 0.03
H-Bond Acceptor 5
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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(2S)-2-amino-5-(2-(2-hydroxyphenyl)hydrazinyl)-5-oxopentanoic acid
(2S)-2-amino-5-[2-(2-hydroxyphenyl)hydrazinyl]-5-oxopentanoic acid
RefChem:177371
CHEMBL1210425
SCHEMBL10017799
CHEBI:218528

2D Structure

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2D Structure of Pygmeine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5477 54.77%
Caco-2 - 0.8200 82.00%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.7633 76.33%
OATP2B1 inhibitior - 0.8636 86.36%
OATP1B1 inhibitior + 0.9587 95.87%
OATP1B3 inhibitior + 0.9418 94.18%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9572 95.72%
BSEP inhibitior - 0.9541 95.41%
P-glycoprotein inhibitior - 0.9849 98.49%
P-glycoprotein substrate - 0.9141 91.41%
CYP3A4 substrate - 0.6496 64.96%
CYP2C9 substrate - 0.6404 64.04%
CYP2D6 substrate - 0.7186 71.86%
CYP3A4 inhibition - 0.9155 91.55%
CYP2C9 inhibition - 0.9211 92.11%
CYP2C19 inhibition - 0.8471 84.71%
CYP2D6 inhibition - 0.9296 92.96%
CYP1A2 inhibition - 0.8864 88.64%
CYP2C8 inhibition - 0.7592 75.92%
CYP inhibitory promiscuity - 0.9769 97.69%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.6100 61.00%
Carcinogenicity (trinary) Non-required 0.6763 67.63%
Eye corrosion - 0.9870 98.70%
Eye irritation - 0.9929 99.29%
Skin irritation - 0.8049 80.49%
Skin corrosion - 0.9410 94.10%
Ames mutagenesis + 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7710 77.10%
Micronuclear + 0.7800 78.00%
Hepatotoxicity + 0.6250 62.50%
skin sensitisation - 0.8658 86.58%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.7448 74.48%
Acute Oral Toxicity (c) III 0.7048 70.48%
Estrogen receptor binding - 0.5416 54.16%
Androgen receptor binding - 0.6959 69.59%
Thyroid receptor binding - 0.6495 64.95%
Glucocorticoid receptor binding + 0.5756 57.56%
Aromatase binding - 0.6138 61.38%
PPAR gamma - 0.6276 62.76%
Honey bee toxicity - 0.9523 95.23%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity - 0.3788 37.88%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.00% 91.11%
CHEMBL221 P23219 Cyclooxygenase-1 95.42% 90.17%
CHEMBL2581 P07339 Cathepsin D 94.60% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.73% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.41% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.63% 96.09%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 92.28% 94.62%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 88.12% 94.08%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.81% 99.15%
CHEMBL1255126 O15151 Protein Mdm4 84.41% 90.20%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.71% 99.23%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.32% 95.50%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 80.90% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 80.87% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 46911433
LOTUS LTS0057893
wikiData Q77566593