Procumbide

Details

Top
Internal ID 5abc2eb1-138c-4261-8170-013b252fdaa3
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2S,3R,4S,5S,6R)-2-[[(1S,2R,4S,5S,6S,10S)-5,6-dihydroxy-2-methyl-3,9-dioxatricyclo[4.4.0.02,4]dec-7-en-10-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C15H22O10/c1-14-9-13(22-3-2-15(9,21)10(20)11(14)25-14)24-12-8(19)7(18)6(17)5(4-16)23-12/h2-3,5-13,16-21H,4H2,1H3/t5-,6-,7+,8-,9-,10+,11+,12+,13+,14-,15+/m1/s1
InChI Key UBAIOTDKPLIEDD-NTRJNKTHSA-N
Popularity 7 references in papers

Physical and Chemical Properties

Top
Molecular Formula C15H22O10
Molecular Weight 362.33 g/mol
Exact Mass 362.12129689 g/mol
Topological Polar Surface Area (TPSA) 162.00 Ų
XlogP -3.20
Atomic LogP (AlogP) -3.45
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 3

Synonyms

Top
20486-27-5
UNII-5F233693T3
5F233693T3
beta-D-Glucopyranoside, (1aR,1bS,2S,5aS,6S,6aS)-1a,1b,2,5a,6,6a-hexahydro-5a,6-dihydroxy-1a-methyloxireno(4,5)cyclopenta(1,2-C)pyran-2-yl
(2S,3R,4S,5S,6R)-2-[[(1S,2R,4S,5S,6S,10S)-5,6-dihydroxy-2-methyl-3,9-dioxatricyclo[4.4.0.02,4]dec-7-en-10-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SCHEMBL1424987
HY-N1543
AKOS032948944
FS-8614
CS-0017092
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Procumbide

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6042 60.42%
Caco-2 - 0.8751 87.51%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5944 59.44%
OATP2B1 inhibitior - 0.8597 85.97%
OATP1B1 inhibitior + 0.8598 85.98%
OATP1B3 inhibitior + 0.9606 96.06%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.9527 95.27%
P-glycoprotein inhibitior - 0.8836 88.36%
P-glycoprotein substrate - 0.8579 85.79%
CYP3A4 substrate + 0.6015 60.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8514 85.14%
CYP3A4 inhibition - 0.9379 93.79%
CYP2C9 inhibition - 0.9168 91.68%
CYP2C19 inhibition - 0.8492 84.92%
CYP2D6 inhibition - 0.9275 92.75%
CYP1A2 inhibition - 0.8922 89.22%
CYP2C8 inhibition - 0.7990 79.90%
CYP inhibitory promiscuity - 0.7933 79.33%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6018 60.18%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9738 97.38%
Skin irritation - 0.7890 78.90%
Skin corrosion - 0.9439 94.39%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4543 45.43%
Micronuclear - 0.6641 66.41%
Hepatotoxicity - 0.8782 87.82%
skin sensitisation - 0.8497 84.97%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity + 0.5924 59.24%
Acute Oral Toxicity (c) III 0.3874 38.74%
Estrogen receptor binding - 0.6171 61.71%
Androgen receptor binding + 0.5397 53.97%
Thyroid receptor binding + 0.6277 62.77%
Glucocorticoid receptor binding - 0.5133 51.33%
Aromatase binding + 0.6446 64.46%
PPAR gamma + 0.6666 66.66%
Honey bee toxicity - 0.8240 82.40%
Biodegradation - 0.5750 57.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity - 0.6079 60.79%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.59% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.67% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.30% 96.61%
CHEMBL226 P30542 Adenosine A1 receptor 89.54% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 86.62% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.19% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.77% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 81.78% 90.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.48% 86.92%
CHEMBL1977 P11473 Vitamin D receptor 80.47% 99.43%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.16% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Andrographis paniculata
Harpagophytum procumbens
Linaria vulgaris
Rogeria adenophylla

Cross-Links

Top
PubChem 21604824
LOTUS LTS0273080
wikiData Q27261947