Pradinone I

Details

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Internal ID dea3b390-c451-4302-a54d-3e9f18fbaae2
Taxonomy Benzenoids > Naphthacenes > Tetracenequinones
IUPAC Name (5S,6S)-1,5,6,9,14-pentahydroxy-11-methoxy-3-methyl-8,13-dioxo-5,6-dihydrobenzo[a]tetracene-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H18O10/c1-7-3-9-16(23(31)14(7)25(33)34)17-11(22(30)21(9)29)6-12-18(24(17)32)20(28)10-4-8(35-2)5-13(26)15(10)19(12)27/h3-6,21-22,26,29-32H,1-2H3,(H,33,34)/t21-,22-/m0/s1
InChI Key YKVHLDYSTLOBDC-VXKWHMMOSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C25H18O10
Molecular Weight 478.40 g/mol
Exact Mass 478.08999677 g/mol
Topological Polar Surface Area (TPSA) 182.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.34
H-Bond Acceptor 9
H-Bond Donor 6
Rotatable Bonds 2

Synonyms

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(5S,6S)-1,5,6,9,14-pentahydroxy-11-methoxy-3-methyl-8,13-dioxo-5,6-dihydrobenzo[a]tetracene-2-carboxylic acid
(5S,6S)-1,5,6,9,14-Pentahydroxy-11-methoxy-3-methyl-8,13-dioxo-5,6,8,13-tetrahydrobenzo[a]tetracene-2-carboxylic acid

2D Structure

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2D Structure of Pradinone I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9186 91.86%
Caco-2 - 0.8064 80.64%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.6832 68.32%
OATP2B1 inhibitior + 0.5780 57.80%
OATP1B1 inhibitior + 0.9084 90.84%
OATP1B3 inhibitior + 0.8917 89.17%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.5523 55.23%
P-glycoprotein inhibitior - 0.6262 62.62%
P-glycoprotein substrate - 0.8706 87.06%
CYP3A4 substrate + 0.5613 56.13%
CYP2C9 substrate - 0.8114 81.14%
CYP2D6 substrate - 0.8609 86.09%
CYP3A4 inhibition - 0.8669 86.69%
CYP2C9 inhibition - 0.8486 84.86%
CYP2C19 inhibition - 0.9592 95.92%
CYP2D6 inhibition - 0.9082 90.82%
CYP1A2 inhibition - 0.5263 52.63%
CYP2C8 inhibition + 0.5862 58.62%
CYP inhibitory promiscuity - 0.8641 86.41%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8975 89.75%
Carcinogenicity (trinary) Non-required 0.6183 61.83%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.7085 70.85%
Skin irritation - 0.6280 62.80%
Skin corrosion - 0.9047 90.47%
Ames mutagenesis - 0.5170 51.70%
Human Ether-a-go-go-Related Gene inhibition - 0.5462 54.62%
Micronuclear + 0.8800 88.00%
Hepatotoxicity + 0.6087 60.87%
skin sensitisation - 0.8719 87.19%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity - 0.5769 57.69%
Acute Oral Toxicity (c) II 0.4357 43.57%
Estrogen receptor binding + 0.7790 77.90%
Androgen receptor binding - 0.5700 57.00%
Thyroid receptor binding - 0.6449 64.49%
Glucocorticoid receptor binding + 0.5720 57.20%
Aromatase binding - 0.6684 66.84%
PPAR gamma + 0.5589 55.89%
Honey bee toxicity - 0.8865 88.65%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.9858 98.58%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.48% 95.56%
CHEMBL2581 P07339 Cathepsin D 95.09% 98.95%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 94.79% 92.68%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.26% 99.15%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.44% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.07% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.34% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.82% 99.23%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.10% 96.09%
CHEMBL340 P08684 Cytochrome P450 3A4 87.54% 91.19%
CHEMBL3194 P02766 Transthyretin 85.86% 90.71%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 85.75% 96.38%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.28% 91.07%
CHEMBL2056 P21728 Dopamine D1 receptor 83.72% 91.00%
CHEMBL1811 P34995 Prostanoid EP1 receptor 82.81% 95.71%
CHEMBL4208 P20618 Proteasome component C5 82.81% 90.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.22% 94.00%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 80.80% 94.42%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.53% 97.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 460846
LOTUS LTS0244101
wikiData Q104403161