Pradimicin-T2

Details

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Internal ID b7e198fb-ae38-4421-8388-d32ade20b698
Taxonomy Benzenoids > Naphthacenes > Tetracenequinones
IUPAC Name 2-[[(5S,6S)-1,6,9,14-tetrahydroxy-3-methyl-8,13-dioxo-5-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy-11-(3,4,5-trihydroxyoxan-2-yl)oxy-5,6-dihydrobenzo[a]tetracene-2-carbonyl]amino]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C37H37NO19/c1-9-3-15-22(29(48)19(9)35(53)38-7-18(41)42)21-13(27(46)34(15)57-37-33(52)31(50)24(43)10(2)55-37)6-14-23(30(21)49)26(45)12-4-11(5-16(39)20(12)25(14)44)56-36-32(51)28(47)17(40)8-54-36/h3-6,10,17,24,27-28,31-34,36-37,39-40,43,46-52H,7-8H2,1-2H3,(H,38,53)(H,41,42)/t10?,17?,24?,27-,28?,31?,32?,33?,34-,36?,37?/m0/s1
InChI Key YNXJAOKAYJEVKX-PTXRADAJSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C37H37NO19
Molecular Weight 799.70 g/mol
Exact Mass 799.19597795 g/mol
Topological Polar Surface Area (TPSA) 340.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -1.88
H-Bond Acceptor 18
H-Bond Donor 12
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Pradimicin-T2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7898 78.98%
Caco-2 - 0.8878 88.78%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Nucleus 0.3965 39.65%
OATP2B1 inhibitior - 0.5673 56.73%
OATP1B1 inhibitior + 0.8632 86.32%
OATP1B3 inhibitior + 0.9486 94.86%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior + 0.9216 92.16%
P-glycoprotein inhibitior + 0.6756 67.56%
P-glycoprotein substrate + 0.6451 64.51%
CYP3A4 substrate + 0.7020 70.20%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8769 87.69%
CYP3A4 inhibition - 0.9154 91.54%
CYP2C9 inhibition - 0.8690 86.90%
CYP2C19 inhibition - 0.8485 84.85%
CYP2D6 inhibition - 0.9274 92.74%
CYP1A2 inhibition - 0.7871 78.71%
CYP2C8 inhibition + 0.6984 69.84%
CYP inhibitory promiscuity - 0.8287 82.87%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6660 66.60%
Eye corrosion - 0.9931 99.31%
Eye irritation - 0.9097 90.97%
Skin irritation - 0.8344 83.44%
Skin corrosion - 0.9550 95.50%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8175 81.75%
Micronuclear + 0.7500 75.00%
Hepatotoxicity - 0.5895 58.95%
skin sensitisation - 0.9031 90.31%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.9648 96.48%
Acute Oral Toxicity (c) III 0.7352 73.52%
Estrogen receptor binding + 0.8347 83.47%
Androgen receptor binding + 0.5217 52.17%
Thyroid receptor binding + 0.5225 52.25%
Glucocorticoid receptor binding + 0.5976 59.76%
Aromatase binding + 0.5399 53.99%
PPAR gamma + 0.7097 70.97%
Honey bee toxicity - 0.7551 75.51%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity - 0.5909 59.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.16% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.30% 98.95%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 97.68% 93.40%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.85% 89.00%
CHEMBL4208 P20618 Proteasome component C5 95.43% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 94.05% 94.73%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 92.61% 91.07%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.81% 96.21%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.65% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.62% 95.56%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 91.03% 99.15%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 90.19% 90.71%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 88.70% 87.67%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.01% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.48% 99.23%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.19% 96.38%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.87% 85.14%
CHEMBL1951 P21397 Monoamine oxidase A 85.09% 91.49%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.28% 96.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 83.74% 96.77%
CHEMBL340 P08684 Cytochrome P450 3A4 83.56% 91.19%
CHEMBL2179 P04062 Beta-glucocerebrosidase 82.47% 85.31%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.12% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.04% 86.33%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.74% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139585555
LOTUS LTS0202587
wikiData Q77425106