Podototarin

Details

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Internal ID 4b89afa4-f513-4ad7-9697-11563067fc01
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (4bS)-3-[(4bS)-2-hydroxy-4b,8,8-trimethyl-1-propan-2-yl-5,6,7,8a,9,10-hexahydrophenanthren-3-yl]-4b,8,8-trimethyl-1-propan-2-yl-5,6,7,8a,9,10-hexahydrophenanthren-2-ol
SMILES (Canonical) CC(C)C1=C(C(=CC2=C1CCC3C2(CCCC3(C)C)C)C4=CC5=C(CCC6C5(CCCC6(C)C)C)C(=C4O)C(C)C)O
SMILES (Isomeric) CC(C)C1=C(C(=CC2=C1CCC3[C@@]2(CCCC3(C)C)C)C4=CC5=C(CCC6[C@@]5(CCCC6(C)C)C)C(=C4O)C(C)C)O
InChI InChI=1S/C40H58O2/c1-23(2)33-25-13-15-31-37(5,6)17-11-19-39(31,9)29(25)21-27(35(33)41)28-22-30-26(34(24(3)4)36(28)42)14-16-32-38(7,8)18-12-20-40(30,32)10/h21-24,31-32,41-42H,11-20H2,1-10H3/t31?,32?,39-,40-/m1/s1
InChI Key RFUVOURUUJLQSB-QFFMKFBWSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C40H58O2
Molecular Weight 570.90 g/mol
Exact Mass 570.44368109 g/mol
Topological Polar Surface Area (TPSA) 40.50 Ų
XlogP 13.10
Atomic LogP (AlogP) 11.07
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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Spectrum_001086
SpecPlus_000128
Spectrum3_001318
Spectrum4_001210
Spectrum5_001703
BSPBio_003015
KBioGR_001620
KBioSS_001566
SPECTRUM100286
DivK1c_006224
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Podototarin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9969 99.69%
Caco-2 - 0.6158 61.58%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.8395 83.95%
OATP2B1 inhibitior - 0.8534 85.34%
OATP1B1 inhibitior + 0.9413 94.13%
OATP1B3 inhibitior + 0.9479 94.79%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.9748 97.48%
P-glycoprotein inhibitior + 0.7171 71.71%
P-glycoprotein substrate - 0.8117 81.17%
CYP3A4 substrate + 0.5982 59.82%
CYP2C9 substrate + 0.7887 78.87%
CYP2D6 substrate + 0.4347 43.47%
CYP3A4 inhibition - 0.8587 85.87%
CYP2C9 inhibition - 0.7946 79.46%
CYP2C19 inhibition - 0.7563 75.63%
CYP2D6 inhibition - 0.9371 93.71%
CYP1A2 inhibition + 0.8196 81.96%
CYP2C8 inhibition + 0.4940 49.40%
CYP inhibitory promiscuity - 0.5110 51.10%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.6811 68.11%
Carcinogenicity (trinary) Non-required 0.5856 58.56%
Eye corrosion - 0.9864 98.64%
Eye irritation - 0.8430 84.30%
Skin irritation - 0.7599 75.99%
Skin corrosion - 0.9711 97.11%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6848 68.48%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.5459 54.59%
skin sensitisation - 0.8215 82.15%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8717 87.17%
Acute Oral Toxicity (c) III 0.7504 75.04%
Estrogen receptor binding + 0.8385 83.85%
Androgen receptor binding + 0.6313 63.13%
Thyroid receptor binding + 0.6677 66.77%
Glucocorticoid receptor binding + 0.7860 78.60%
Aromatase binding + 0.7432 74.32%
PPAR gamma + 0.7345 73.45%
Honey bee toxicity - 0.9033 90.33%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293227 O75604 Ubiquitin carboxyl-terminal hydrolase 2 794.3 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.80% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.13% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.08% 98.95%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 90.06% 90.71%
CHEMBL4835 P00338 L-lactate dehydrogenase A chain 89.54% 95.34%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.93% 100.00%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 87.75% 91.79%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 87.38% 93.40%
CHEMBL1951 P21397 Monoamine oxidase A 87.10% 91.49%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.10% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.56% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.19% 97.25%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.09% 82.69%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.67% 93.56%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 83.91% 95.64%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.84% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.81% 92.94%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.27% 99.15%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 81.78% 85.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.67% 95.56%
CHEMBL237 P41145 Kappa opioid receptor 80.82% 98.10%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 80.52% 96.38%
CHEMBL5203 P33316 dUTP pyrophosphatase 80.21% 99.18%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Podocarpus macrophyllus

Cross-Links

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PubChem 5320650
NPASS NPC101933