Pithelucoside A

Details

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Internal ID cedc5053-c01f-48f1-baec-4e1fda67bf7b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S,6R)-3-[(2S,3R,4S,5S,6S)-5-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-6-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl] (3S,4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5S,6R)-6-[[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-methyl-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-5-hydroxy-3-[(2E,6R)-2-(hydroxymethyl)-6-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyocta-2,7-dienoyl]oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(OC(C2OC3C(C(C(O3)CO)O)O)C)OC4C(C(C(OC4OC(=O)C56CC(C(CC5C7=CCC8C9(CCC(C(C9CCC8(C7(CC6O)C)C)(C)C)OC1C(C(C(C(O1)COC1C(C(C(C(O1)C)O)O)OC1C(C(C(CO1)O)O)O)O)O)O)C)(C)C)OC(=O)C(=CCCC(C)(C=C)OC1C(C(C(C(O1)C)O)O)O)CO)CO)O)O)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2[C@H]([C@@H](O[C@H]([C@@H]2O[C@H]3[C@@H]([C@H]([C@@H](O3)CO)O)O)C)O[C@@H]4[C@H]([C@@H]([C@H](O[C@H]4OC(=O)[C@]56C[C@@H](C(C[C@H]5C7=CC[C@@H]8[C@]9(CC[C@@H](C([C@@H]9CC[C@]8([C@@]7(C[C@H]6O)C)C)(C)C)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)C)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O)O)O)C)(C)C)OC(=O)/C(=C/CC[C@](C)(C=C)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)C)O)O)O)/CO)CO)O)O)O)O)O)O
InChI InChI=1S/C86H138O42/c1-14-82(10,128-76-64(108)56(100)49(93)33(3)115-76)21-15-16-36(27-87)70(110)121-47-26-86(79(111)127-78-69(59(103)52(96)40(28-88)119-78)126-75-65(109)67(124-72-62(106)55(99)48(92)32(2)114-72)66(35(5)117-75)123-74-61(105)53(97)41(29-89)118-74)38(24-80(47,6)7)37-17-18-44-83(11)22-20-46(81(8,9)43(83)19-23-84(44,12)85(37,13)25-45(86)91)122-73-63(107)57(101)54(98)42(120-73)31-113-77-68(58(102)50(94)34(4)116-77)125-71-60(104)51(95)39(90)30-112-71/h14,16-17,32-35,38-69,71-78,87-109H,1,15,18-31H2,2-13H3/b36-16+/t32-,33-,34-,35+,38+,39-,40-,41+,42-,43+,44-,45-,46+,47+,48-,49-,50+,51+,52-,53+,54-,55+,56+,57+,58+,59+,60-,61-,62-,63-,64-,65-,66+,67+,68-,69-,71+,72+,73+,74+,75+,76+,77-,78+,82+,83+,84-,85-,86-/m1/s1
InChI Key PZLNJPUTSIOXFO-KAFBCYSGSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C86H138O42
Molecular Weight 1844.00 g/mol
Exact Mass 1842.8662684 g/mol
Topological Polar Surface Area (TPSA) 656.00 Ų
XlogP -4.30
Atomic LogP (AlogP) -6.22
H-Bond Acceptor 42
H-Bond Donor 23
Rotatable Bonds 26

Synonyms

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CHEMBL401800

2D Structure

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2D Structure of Pithelucoside A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8249 82.49%
Caco-2 - 0.8578 85.78%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.8531 85.31%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7231 72.31%
OATP1B3 inhibitior + 0.8176 81.76%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9610 96.10%
P-glycoprotein inhibitior + 0.7424 74.24%
P-glycoprotein substrate + 0.7492 74.92%
CYP3A4 substrate + 0.7591 75.91%
CYP2C9 substrate - 0.8028 80.28%
CYP2D6 substrate - 0.8775 87.75%
CYP3A4 inhibition - 0.7537 75.37%
CYP2C9 inhibition - 0.8161 81.61%
CYP2C19 inhibition - 0.9031 90.31%
CYP2D6 inhibition - 0.9388 93.88%
CYP1A2 inhibition - 0.9015 90.15%
CYP2C8 inhibition + 0.8368 83.68%
CYP inhibitory promiscuity - 0.9487 94.87%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5007 50.07%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.8958 89.58%
Skin irritation + 0.5192 51.92%
Skin corrosion - 0.9321 93.21%
Ames mutagenesis - 0.6870 68.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7641 76.41%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.8968 89.68%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.8829 88.29%
Acute Oral Toxicity (c) III 0.6807 68.07%
Estrogen receptor binding + 0.5617 56.17%
Androgen receptor binding + 0.7655 76.55%
Thyroid receptor binding + 0.7625 76.25%
Glucocorticoid receptor binding + 0.8296 82.96%
Aromatase binding + 0.7485 74.85%
PPAR gamma + 0.8032 80.32%
Honey bee toxicity - 0.5946 59.46%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9841 98.41%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.34% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.50% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 95.84% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.12% 97.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.50% 97.36%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.00% 96.09%
CHEMBL1937 Q92769 Histone deacetylase 2 91.73% 94.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.68% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.18% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.45% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.09% 89.00%
CHEMBL233 P35372 Mu opioid receptor 90.00% 97.93%
CHEMBL2179 P04062 Beta-glucocerebrosidase 89.66% 85.31%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 88.83% 83.57%
CHEMBL5028 O14672 ADAM10 88.27% 97.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.06% 95.56%
CHEMBL325 Q13547 Histone deacetylase 1 87.77% 95.92%
CHEMBL2581 P07339 Cathepsin D 87.33% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 86.47% 94.73%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 86.21% 96.90%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.83% 95.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.04% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.23% 86.92%
CHEMBL5255 O00206 Toll-like receptor 4 82.91% 92.50%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.88% 91.07%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.75% 99.17%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.03% 92.94%
CHEMBL1871 P10275 Androgen Receptor 81.86% 96.43%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.57% 100.00%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 80.36% 95.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Archidendron lucidum

Cross-Links

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PubChem 44448255
LOTUS LTS0159896
wikiData Q105217017