phosphoribosyl-AMP

Details

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Internal ID b08b0745-0ce8-4a18-9355-6ae9f3cb97b5
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleotides > Purine ribonucleotides > Purine ribonucleoside monophosphates
IUPAC Name [(2R,3S,4R,5R)-5-[1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]-6-iminopurin-9-yl]-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C15H23N5O14P2/c16-12-7-13(18-4-19(12)14-10(23)8(21)5(33-14)1-31-35(25,26)27)20(3-17-7)15-11(24)9(22)6(34-15)2-32-36(28,29)30/h3-6,8-11,14-16,21-24H,1-2H2,(H2,25,26,27)(H2,28,29,30)/t5-,6-,8-,9-,10-,11-,14-,15-/m1/s1
InChI Key RTQMRTSPTLIIHM-KEOHHSTQSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C15H23N5O14P2
Molecular Weight 559.32 g/mol
Exact Mass 559.07167442 g/mol
Topological Polar Surface Area (TPSA) 290.00 Ų
XlogP -6.70
Atomic LogP (AlogP) -3.83
H-Bond Acceptor 15
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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N1-(5-phospho-D-ribosyl)-AMP
1-(5-Phosphoribosyl)-AMP
5-phosphoribosyl-AMP
1-(5-Phospho-beta-D-ribosyl)-AMP
1-(5-phospho-beta-D-ribosyl)-5'-AMP
1-(5-phospho-beta-D-ribofuranosyl)-5'-adenylic acid
1-(5-O-phosphono-beta-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate)
N-(5-phospho-D-ribosyl)-AMP
N-(5'-phospho-D-ribosyl)-AMP
SCHEMBL939116
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of phosphoribosyl-AMP

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6240 62.40%
Caco-2 - 0.8611 86.11%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.4889 48.89%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9495 94.95%
OATP1B3 inhibitior + 0.9435 94.35%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7798 77.98%
P-glycoprotein inhibitior + 0.5756 57.56%
P-glycoprotein substrate - 0.8777 87.77%
CYP3A4 substrate + 0.5154 51.54%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8743 87.43%
CYP3A4 inhibition - 0.8413 84.13%
CYP2C9 inhibition - 0.9039 90.39%
CYP2C19 inhibition - 0.9011 90.11%
CYP2D6 inhibition - 0.8929 89.29%
CYP1A2 inhibition - 0.8317 83.17%
CYP2C8 inhibition - 0.8226 82.26%
CYP inhibitory promiscuity - 0.9517 95.17%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8800 88.00%
Carcinogenicity (trinary) Non-required 0.5936 59.36%
Eye corrosion - 0.9854 98.54%
Eye irritation - 0.9304 93.04%
Skin irritation - 0.7600 76.00%
Skin corrosion - 0.9256 92.56%
Ames mutagenesis - 0.7391 73.91%
Human Ether-a-go-go-Related Gene inhibition + 0.6474 64.74%
Micronuclear + 0.9900 99.00%
Hepatotoxicity - 0.5397 53.97%
skin sensitisation - 0.8383 83.83%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9875 98.75%
Nephrotoxicity - 0.8001 80.01%
Acute Oral Toxicity (c) III 0.5421 54.21%
Estrogen receptor binding + 0.5940 59.40%
Androgen receptor binding + 0.6201 62.01%
Thyroid receptor binding + 0.5327 53.27%
Glucocorticoid receptor binding - 0.4699 46.99%
Aromatase binding + 0.7016 70.16%
PPAR gamma + 0.5786 57.86%
Honey bee toxicity - 0.7261 72.61%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6055 60.55%
Fish aquatic toxicity - 0.3854 38.54%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.81% 96.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 97.16% 80.33%
CHEMBL226 P30542 Adenosine A1 receptor 95.04% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 94.42% 94.73%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 89.02% 94.01%
CHEMBL5957 P21589 5'-nucleotidase 88.22% 97.78%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.64% 94.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.86% 96.00%
CHEMBL4040 P28482 MAP kinase ERK2 82.45% 83.82%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.50% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.43% 89.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 80.27% 93.10%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.01% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 11988267
LOTUS LTS0131013
wikiData Q27103039