Phormidinine A

Details

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Internal ID c5261379-465f-4cad-a72f-20be4ee87107
Taxonomy Organoheterocyclic compounds > Pyridines and derivatives
IUPAC Name (2R,6E,8E)-12-pyridin-2-yldodeca-6,8-dien-2-ol
SMILES (Canonical) CC(CCCC=CC=CCCCC1=CC=CC=N1)O
SMILES (Isomeric) C[C@H](CCC/C=C/C=C/CCCC1=CC=CC=N1)O
InChI InChI=1S/C17H25NO/c1-16(19)12-8-6-4-2-3-5-7-9-13-17-14-10-11-15-18-17/h2-5,10-11,14-16,19H,6-9,12-13H2,1H3/b4-2+,5-3+/t16-/m1/s1
InChI Key KUXJKPYGNYWXQB-AQPXMDQQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H25NO
Molecular Weight 259.40 g/mol
Exact Mass 259.193614421 g/mol
Topological Polar Surface Area (TPSA) 33.10 Ų
XlogP 3.80
Atomic LogP (AlogP) 4.07
H-Bond Acceptor 2
H-Bond Donor 1
Rotatable Bonds 9

Synonyms

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(2R,6E,8E)-12-pyridin-2-yldodeca-6,8-dien-2-ol
RefChem:173480
856240-88-5
CHEBI:189265
DTXSID601046295

2D Structure

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2D Structure of Phormidinine A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9959 99.59%
Caco-2 + 0.8033 80.33%
Blood Brain Barrier + 0.9500 95.00%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.4185 41.85%
OATP2B1 inhibitior - 0.8604 86.04%
OATP1B1 inhibitior + 0.9188 91.88%
OATP1B3 inhibitior + 0.9434 94.34%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.5930 59.30%
P-glycoprotein inhibitior - 0.9013 90.13%
P-glycoprotein substrate - 0.6706 67.06%
CYP3A4 substrate - 0.5293 52.93%
CYP2C9 substrate - 0.6219 62.19%
CYP2D6 substrate - 0.7401 74.01%
CYP3A4 inhibition - 0.8929 89.29%
CYP2C9 inhibition - 0.8606 86.06%
CYP2C19 inhibition - 0.7607 76.07%
CYP2D6 inhibition - 0.8764 87.64%
CYP1A2 inhibition - 0.5261 52.61%
CYP2C8 inhibition - 0.7699 76.99%
CYP inhibitory promiscuity - 0.8870 88.70%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8828 88.28%
Carcinogenicity (trinary) Non-required 0.7069 70.69%
Eye corrosion - 0.9399 93.99%
Eye irritation - 0.6989 69.89%
Skin irritation + 0.6589 65.89%
Skin corrosion - 0.5550 55.50%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7333 73.33%
Micronuclear - 0.8200 82.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.5302 53.02%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7862 78.62%
Acute Oral Toxicity (c) III 0.5541 55.41%
Estrogen receptor binding + 0.5823 58.23%
Androgen receptor binding - 0.7697 76.97%
Thyroid receptor binding + 0.5878 58.78%
Glucocorticoid receptor binding + 0.6457 64.57%
Aromatase binding - 0.4926 49.26%
PPAR gamma + 0.7762 77.62%
Honey bee toxicity - 0.9537 95.37%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity - 0.8853 88.53%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 95.83% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.23% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 93.65% 94.73%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 90.15% 94.62%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.37% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.34% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.45% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.41% 99.17%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 83.33% 88.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 83.13% 93.10%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.43% 100.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 80.99% 89.62%
CHEMBL1907598 P05106 Integrin alpha-V/beta-3 80.10% 95.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 21778133
LOTUS LTS0210395
wikiData Q77424081