Phomodiol

Details

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Internal ID c5edb269-9061-4ff3-9790-1ae186368650
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Monosaccharides
IUPAC Name 1-[(1S,2S,4aR,6R,8aS)-1,2,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2H-naphthalen-1-yl]-2,3-dihydroxypropan-1-one
SMILES (Canonical) CC1CCC2C(C1)C=CC(C2(C)C(=O)C(CO)O)C
SMILES (Isomeric) C[C@@H]1CC[C@H]2[C@H](C1)C=C[C@@H]([C@]2(C)C(=O)C(CO)O)C
InChI InChI=1S/C16H26O3/c1-10-4-7-13-12(8-10)6-5-11(2)16(13,3)15(19)14(18)9-17/h5-6,10-14,17-18H,4,7-9H2,1-3H3/t10-,11+,12+,13+,14?,16+/m1/s1
InChI Key DVHGMKCUXINIRR-DSDJHQIASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C16H26O3
Molecular Weight 266.38 g/mol
Exact Mass 266.18819469 g/mol
Topological Polar Surface Area (TPSA) 57.50 Ų
XlogP 2.70
Atomic LogP (AlogP) 2.17
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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RefChem:173322
SCHEMBL30140468
CHEBI:215250
1-[(1S,2S,4aR,6R,8aS)-1,2,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2H-naphthalen-1-yl]-2,3-dihydroxypropan-1-one

2D Structure

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2D Structure of Phomodiol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9905 99.05%
Caco-2 + 0.6477 64.77%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.6437 64.37%
OATP2B1 inhibitior - 0.8532 85.32%
OATP1B1 inhibitior + 0.9194 91.94%
OATP1B3 inhibitior + 0.9336 93.36%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7631 76.31%
BSEP inhibitior - 0.9017 90.17%
P-glycoprotein inhibitior - 0.9433 94.33%
P-glycoprotein substrate - 0.7889 78.89%
CYP3A4 substrate + 0.6062 60.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8163 81.63%
CYP3A4 inhibition - 0.7125 71.25%
CYP2C9 inhibition - 0.8347 83.47%
CYP2C19 inhibition - 0.8685 86.85%
CYP2D6 inhibition - 0.9416 94.16%
CYP1A2 inhibition - 0.6602 66.02%
CYP2C8 inhibition - 0.8849 88.49%
CYP inhibitory promiscuity - 0.9120 91.20%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8500 85.00%
Carcinogenicity (trinary) Non-required 0.6802 68.02%
Eye corrosion - 0.9858 98.58%
Eye irritation - 0.9507 95.07%
Skin irritation - 0.6827 68.27%
Skin corrosion - 0.9697 96.97%
Ames mutagenesis - 0.5937 59.37%
Human Ether-a-go-go-Related Gene inhibition - 0.5527 55.27%
Micronuclear - 0.9300 93.00%
Hepatotoxicity - 0.5169 51.69%
skin sensitisation - 0.7282 72.82%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.6582 65.82%
Acute Oral Toxicity (c) III 0.6692 66.92%
Estrogen receptor binding - 0.6682 66.82%
Androgen receptor binding - 0.5666 56.66%
Thyroid receptor binding - 0.4916 49.16%
Glucocorticoid receptor binding - 0.4774 47.74%
Aromatase binding - 0.6232 62.32%
PPAR gamma - 0.8404 84.04%
Honey bee toxicity - 0.8606 86.06%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9419 94.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.44% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.79% 97.25%
CHEMBL4040 P28482 MAP kinase ERK2 93.25% 83.82%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.36% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.70% 91.11%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.36% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 84.31% 91.19%
CHEMBL2581 P07339 Cathepsin D 84.28% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.16% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.75% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.30% 94.45%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.47% 98.46%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.29% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9970169
LOTUS LTS0018515
wikiData Q104990124