Phomazine B

Details

Top
Internal ID b59fc023-c2e0-4d60-bd5e-3d2af9c2bd10
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (3R,5aS,6S,10aR)-3-benzyl-6-hydroxy-3,10a-bis(methylsulfanyl)-2,5a,6,10-tetrahydropyrazino[1,2-a]indole-1,4-dione
SMILES (Canonical) CSC12CC3=CC=CC(C3N1C(=O)C(NC2=O)(CC4=CC=CC=C4)SC)O
SMILES (Isomeric) CS[C@@]12CC3=CC=C[C@@H]([C@H]3N1C(=O)[C@@](NC2=O)(CC4=CC=CC=C4)SC)O
InChI InChI=1S/C20H22N2O3S2/c1-26-19(11-13-7-4-3-5-8-13)18(25)22-16-14(9-6-10-15(16)23)12-20(22,27-2)17(24)21-19/h3-10,15-16,23H,11-12H2,1-2H3,(H,21,24)/t15-,16-,19+,20+/m0/s1
InChI Key RLFWHXFCMHLBFD-XAMWDVODSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C20H22N2O3S2
Molecular Weight 402.50 g/mol
Exact Mass 402.10718492 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP 2.00
Atomic LogP (AlogP) 1.94
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

Top
RefChem:173301
(3R)-Thiomethyl-3,11-Dihydrophomazine A
(3R,5aS,6S,10aR)-3-benzyl-6-hydroxy-3,10a-bis(methylsulfanyl)-2,5a,6,10-tetrahydropyrazino(1,2-a)indole-1,4-dione
CHEMBL3104417
CHEBI:205263
(3R,5aS,6S,10aR)-3-benzyl-6-hydroxy-3,10a-bis(methylsulanyl)-2,5a,6,10-tetrahydropyrazino[1,2-a]indole-1,4-dione

2D Structure

Top
2D Structure of Phomazine B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9450 94.50%
Caco-2 - 0.5234 52.34%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.5939 59.39%
OATP2B1 inhibitior - 0.8602 86.02%
OATP1B1 inhibitior + 0.8927 89.27%
OATP1B3 inhibitior + 0.9402 94.02%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7649 76.49%
BSEP inhibitior + 0.5784 57.84%
P-glycoprotein inhibitior - 0.7069 70.69%
P-glycoprotein substrate + 0.5282 52.82%
CYP3A4 substrate + 0.5905 59.05%
CYP2C9 substrate - 0.5907 59.07%
CYP2D6 substrate - 0.8079 80.79%
CYP3A4 inhibition + 0.5583 55.83%
CYP2C9 inhibition - 0.6120 61.20%
CYP2C19 inhibition - 0.5936 59.36%
CYP2D6 inhibition - 0.7769 77.69%
CYP1A2 inhibition - 0.6412 64.12%
CYP2C8 inhibition - 0.5766 57.66%
CYP inhibitory promiscuity + 0.6922 69.22%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.9000 90.00%
Carcinogenicity (trinary) Non-required 0.5497 54.97%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.9923 99.23%
Skin irritation - 0.7553 75.53%
Skin corrosion - 0.9225 92.25%
Ames mutagenesis - 0.7054 70.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7530 75.30%
Micronuclear + 0.8500 85.00%
Hepatotoxicity + 0.7181 71.81%
skin sensitisation - 0.8384 83.84%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.5525 55.25%
Acute Oral Toxicity (c) III 0.4901 49.01%
Estrogen receptor binding + 0.6056 60.56%
Androgen receptor binding + 0.7019 70.19%
Thyroid receptor binding + 0.5643 56.43%
Glucocorticoid receptor binding - 0.4664 46.64%
Aromatase binding + 0.5823 58.23%
PPAR gamma - 0.5434 54.34%
Honey bee toxicity - 0.8245 82.45%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.8789 87.89%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.02% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.49% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.21% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.83% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.99% 86.33%
CHEMBL221 P23219 Cyclooxygenase-1 89.95% 90.17%
CHEMBL4208 P20618 Proteasome component C5 87.48% 90.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.08% 85.14%
CHEMBL5805 Q9NR97 Toll-like receptor 8 81.29% 96.25%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 80.90% 97.64%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 73891065
LOTUS LTS0064521
wikiData Q77423212