Phomanolide A

Details

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Internal ID dabe7280-4b9b-480b-b149-fa0deffc35dc
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans
IUPAC Name (2Z)-2-[(1S,2S,4R,6S,9S,11E,15R)-2,20-dihydroxy-1,3',9,13,13,18-hexamethyl-5'-oxospiro[8,23-dioxatetracyclo[13.8.0.04,9.017,22]tricosa-11,17(22),18,20-tetraene-6,2'-furan]-7-ylidene]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C32H40O8/c1-18-10-22(33)14-24-23(18)12-21-16-29(3,4)8-7-9-30(5)20(13-25(34)31(21,6)38-24)17-32(19(2)11-28(37)40-32)26(39-30)15-27(35)36/h7-8,10-11,14-15,20-21,25,33-34H,9,12-13,16-17H2,1-6H3,(H,35,36)/b8-7+,26-15-/t20-,21+,25+,30+,31+,32+/m1/s1
InChI Key OXSJMQHDCNTXLE-CJFYNQMGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C32H40O8
Molecular Weight 552.70 g/mol
Exact Mass 552.27231823 g/mol
Topological Polar Surface Area (TPSA) 123.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 5.14
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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RefChem:173280
(2Z)-2-((1S,2S,4R,6S,9S,11E,15R)-2,20-dihydroxy-1,3',9,13,13,18-hexamethyl-5'-oxospiro(8,23-dioxatetracyclo(13.8.0.04,9.017,22)tricosa-11,17(22),18,20-tetraene-6,2'-furan)-7-ylidene)acetic acid
CHEMBL3759655
CHEBI:216227
(2Z)-2-[(1S,2S,4R,6S,9S,11E,15R)-2,20-dihydroxy-1,3',9,13,13,18-hexamethyl-5'-oxospiro[8,23-dioxatetracyclo[13.8.0.04,9.017,22]tricosa-11,17(22),18,20-tetraene-6,2'-uran]-7-ylidene]acetic acid

2D Structure

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2D Structure of Phomanolide A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9870 98.70%
Caco-2 - 0.6651 66.51%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7359 73.59%
OATP2B1 inhibitior - 0.8526 85.26%
OATP1B1 inhibitior + 0.8252 82.52%
OATP1B3 inhibitior + 0.9264 92.64%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9975 99.75%
P-glycoprotein inhibitior + 0.8208 82.08%
P-glycoprotein substrate + 0.5837 58.37%
CYP3A4 substrate + 0.6914 69.14%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8645 86.45%
CYP3A4 inhibition - 0.5924 59.24%
CYP2C9 inhibition - 0.7274 72.74%
CYP2C19 inhibition - 0.7381 73.81%
CYP2D6 inhibition - 0.9052 90.52%
CYP1A2 inhibition - 0.5980 59.80%
CYP2C8 inhibition + 0.7234 72.34%
CYP inhibitory promiscuity - 0.8241 82.41%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Danger 0.4666 46.66%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.8988 89.88%
Skin irritation - 0.5814 58.14%
Skin corrosion - 0.9185 91.85%
Ames mutagenesis - 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7510 75.10%
Micronuclear - 0.6000 60.00%
Hepatotoxicity - 0.5619 56.19%
skin sensitisation - 0.7559 75.59%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity + 0.5807 58.07%
Acute Oral Toxicity (c) I 0.7019 70.19%
Estrogen receptor binding + 0.8403 84.03%
Androgen receptor binding + 0.7088 70.88%
Thyroid receptor binding + 0.6190 61.90%
Glucocorticoid receptor binding + 0.8660 86.60%
Aromatase binding + 0.7709 77.09%
PPAR gamma + 0.6445 64.45%
Honey bee toxicity - 0.6863 68.63%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.57% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 98.90% 83.82%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.57% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.56% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.30% 94.45%
CHEMBL2581 P07339 Cathepsin D 92.05% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.61% 96.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.41% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.31% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.92% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.74% 100.00%
CHEMBL279 P35968 Vascular endothelial growth factor receptor 2 82.64% 95.52%
CHEMBL1951 P21397 Monoamine oxidase A 82.09% 91.49%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.68% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 80.78% 91.19%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.32% 95.89%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 80.16% 90.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 127025232
LOTUS LTS0022059
wikiData Q77563965