1-(4-Amino-2-oxo-1(2H)-pyrimidinyl)-1-deoxy-beta-D-glucopyranuronic acid

Details

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Internal ID dbdc6bba-d61f-45e3-83c6-6be01bc68af5
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glucuronides > N-glucuronides
IUPAC Name (2S,3S,4S,5R,6R)-6-(4-amino-2-oxopyrimidin-1-yl)-3,4,5-trihydroxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C10H13N3O7/c11-3-1-2-13(10(19)12-3)8-6(16)4(14)5(15)7(20-8)9(17)18/h1-2,4-8,14-16H,(H,17,18)(H2,11,12,19)/t4-,5-,6+,7-,8+/m0/s1
InChI Key CHKIQPXDGYGCHW-YOWKYNACSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C10H13N3O7
Molecular Weight 287.23 g/mol
Exact Mass 287.07534976 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -3.11
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 2

Synonyms

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Cytosylglucuronic acid
59862-05-4
1-(beta-D-Glucopyranosyluronic acid)cytosine
(2S,3S,4S,5R,6R)-6-(4-amino-2-oxopyrimidin-1-yl)-3,4,5-trihydroxyoxane-2-carboxylic acid
(2~{S},3~{S},4~{S},5~{R},6~{R})-6-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid
cytosyl-beta-D-glucuronic acid
1-(beta-D-glucuronosyl)cytosine
DTXSID00975264
CHEBI:132133
Q27225435
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1-(4-Amino-2-oxo-1(2H)-pyrimidinyl)-1-deoxy-beta-D-glucopyranuronic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5509 55.09%
Caco-2 - 0.9377 93.77%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Nucleus 0.4424 44.24%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9580 95.80%
OATP1B3 inhibitior + 0.9445 94.45%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9919 99.19%
P-glycoprotein inhibitior - 0.9393 93.93%
P-glycoprotein substrate - 0.9693 96.93%
CYP3A4 substrate - 0.6318 63.18%
CYP2C9 substrate - 0.6075 60.75%
CYP2D6 substrate - 0.8954 89.54%
CYP3A4 inhibition - 0.9058 90.58%
CYP2C9 inhibition - 0.8470 84.70%
CYP2C19 inhibition - 0.7598 75.98%
CYP2D6 inhibition - 0.9130 91.30%
CYP1A2 inhibition - 0.9043 90.43%
CYP2C8 inhibition - 0.9385 93.85%
CYP inhibitory promiscuity - 0.9818 98.18%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.6343 63.43%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9456 94.56%
Skin irritation - 0.7799 77.99%
Skin corrosion - 0.9504 95.04%
Ames mutagenesis - 0.8370 83.70%
Human Ether-a-go-go-Related Gene inhibition - 0.8356 83.56%
Micronuclear + 0.9400 94.00%
Hepatotoxicity + 0.6659 66.59%
skin sensitisation - 0.8835 88.35%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.6457 64.57%
Acute Oral Toxicity (c) III 0.6154 61.54%
Estrogen receptor binding - 0.7625 76.25%
Androgen receptor binding + 0.7580 75.80%
Thyroid receptor binding - 0.5805 58.05%
Glucocorticoid receptor binding - 0.6071 60.71%
Aromatase binding - 0.5820 58.20%
PPAR gamma + 0.5784 57.84%
Honey bee toxicity - 0.9456 94.56%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.5847 58.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137261 O14744 PRMT5/MEP50 complex 93.60% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.56% 96.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.44% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.17% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 84.22% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.07% 95.56%
CHEMBL3891 P07384 Calpain 1 81.61% 93.04%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.43% 98.46%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 191536
LOTUS LTS0007042
wikiData Q27225435