Penicimarin I

Details

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Internal ID 1eadb3a3-9667-409a-ac13-dd2f20662640
Taxonomy Organoheterocyclic compounds > Benzopyrans > 2-benzopyrans
IUPAC Name methyl 3-[(3R)-8-hydroxy-1-oxo-3,4-dihydroisochromen-3-yl]propanoate
SMILES (Canonical) COC(=O)CCC1CC2=C(C(=CC=C2)O)C(=O)O1
SMILES (Isomeric) COC(=O)CC[C@@H]1CC2=C(C(=CC=C2)O)C(=O)O1
InChI InChI=1S/C13H14O5/c1-17-11(15)6-5-9-7-8-3-2-4-10(14)12(8)13(16)18-9/h2-4,9,14H,5-7H2,1H3/t9-/m1/s1
InChI Key DOFCTMZPVWXBQU-SECBINFHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C13H14O5
Molecular Weight 250.25 g/mol
Exact Mass 250.08412354 g/mol
Topological Polar Surface Area (TPSA) 72.80 Ų
XlogP 2.30
Atomic LogP (AlogP) 1.43
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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methyl 3-[(3R)-8-hydroxy-1-oxo-3,4-dihydroisochromen-3-yl]propanoate
methyl 3-((3R)-8-hydroxy-1-oxo-3,4-dihydroisochromen-3-yl)propanoate
Methyl 3-((3R)-8-hydroxy-1-oxo-3,4-dihydro-1H-2-benzopyran-3-yl)propanoic acid
Methyl 3-[(3R)-8-hydroxy-1-oxo-3,4-dihydro-1H-2-benzopyran-3-yl]propanoic acid
RefChem:170966
CHEBI:212154

2D Structure

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2D Structure of Penicimarin I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9480 94.80%
Caco-2 + 0.8083 80.83%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.7882 78.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8721 87.21%
OATP1B3 inhibitior + 0.9596 95.96%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9066 90.66%
P-glycoprotein inhibitior - 0.9401 94.01%
P-glycoprotein substrate - 0.7690 76.90%
CYP3A4 substrate + 0.5225 52.25%
CYP2C9 substrate + 0.6157 61.57%
CYP2D6 substrate - 0.8525 85.25%
CYP3A4 inhibition - 0.7919 79.19%
CYP2C9 inhibition - 0.6154 61.54%
CYP2C19 inhibition - 0.6058 60.58%
CYP2D6 inhibition - 0.8604 86.04%
CYP1A2 inhibition + 0.6897 68.97%
CYP2C8 inhibition - 0.8386 83.86%
CYP inhibitory promiscuity - 0.7511 75.11%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6857 68.57%
Eye corrosion - 0.9735 97.35%
Eye irritation + 0.8279 82.79%
Skin irritation - 0.7307 73.07%
Skin corrosion - 0.9389 93.89%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4451 44.51%
Micronuclear - 0.7500 75.00%
Hepatotoxicity + 0.5535 55.35%
skin sensitisation - 0.9225 92.25%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity + 0.6452 64.52%
Acute Oral Toxicity (c) III 0.5386 53.86%
Estrogen receptor binding - 0.5210 52.10%
Androgen receptor binding + 0.5359 53.59%
Thyroid receptor binding - 0.6636 66.36%
Glucocorticoid receptor binding - 0.7064 70.64%
Aromatase binding - 0.8598 85.98%
PPAR gamma - 0.4889 48.89%
Honey bee toxicity - 0.9410 94.10%
Biodegradation - 0.5500 55.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.8865 88.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.81% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.96% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.67% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.87% 96.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.54% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.97% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.51% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 87.82% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.45% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.32% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.87% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.73% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 80.84% 91.19%
CHEMBL217 P14416 Dopamine D2 receptor 80.61% 95.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 139590398
LOTUS LTS0019765
wikiData Q104985954