Penibruguieramine A

Details

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Internal ID 98615f35-9fa1-4b54-9957-1c3bbebb5c49
Taxonomy Organoheterocyclic compounds > Pyrrolizidines > Pyrrolizidinones
IUPAC Name (1R,2S,8S)-1-hept-5-enyl-1-hydroxy-8-(hydroxymethyl)-2-methyl-2,5,6,7-tetrahydropyrrolizin-3-one
SMILES (Canonical) CC=CCCCCC1(C(C(=O)N2C1(CCC2)CO)C)O
SMILES (Isomeric) CC=CCCCC[C@]1([C@@H](C(=O)N2[C@@]1(CCC2)CO)C)O
InChI InChI=1S/C16H27NO3/c1-3-4-5-6-7-10-16(20)13(2)14(19)17-11-8-9-15(16,17)12-18/h3-4,13,18,20H,5-12H2,1-2H3/t13-,15+,16-/m1/s1
InChI Key XEJNHBMJNYJKBH-VNQPRFMTSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C16H27NO3
Molecular Weight 281.39 g/mol
Exact Mass 281.19909372 g/mol
Topological Polar Surface Area (TPSA) 60.80 Ų
XlogP 2.00
Atomic LogP (AlogP) 1.86
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 6

Synonyms

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RefChem:928731
(1R,2S,8S)-1-((E)-hept-5-enyl)-1-hydroxy-8-(hydroxymethyl)-2-methyl-2,5,6,7-tetrahydropyrrolizin-3-one
CHEBI:208712
(1R,2S,8S)-1-hept-5-enyl-1-hydroxy-8-(hydroxymethyl)-2-methyl-2,5,6,7-tetrahydropyrrolizin-3-one

2D Structure

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2D Structure of Penibruguieramine A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9618 96.18%
Caco-2 + 0.7932 79.32%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Mitochondria 0.6023 60.23%
OATP2B1 inhibitior - 0.8550 85.50%
OATP1B1 inhibitior + 0.8390 83.90%
OATP1B3 inhibitior + 0.9470 94.70%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.7728 77.28%
P-glycoprotein inhibitior - 0.9196 91.96%
P-glycoprotein substrate - 0.6896 68.96%
CYP3A4 substrate + 0.5563 55.63%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8624 86.24%
CYP3A4 inhibition - 0.9705 97.05%
CYP2C9 inhibition - 0.8973 89.73%
CYP2C19 inhibition - 0.9053 90.53%
CYP2D6 inhibition - 0.9010 90.10%
CYP1A2 inhibition - 0.9006 90.06%
CYP2C8 inhibition - 0.9429 94.29%
CYP inhibitory promiscuity - 0.8678 86.78%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5438 54.38%
Eye corrosion - 0.9861 98.61%
Eye irritation - 0.9339 93.39%
Skin irritation - 0.7406 74.06%
Skin corrosion - 0.9022 90.22%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6890 68.90%
Micronuclear + 0.5300 53.00%
Hepatotoxicity - 0.5000 50.00%
skin sensitisation - 0.8727 87.27%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.6667 66.67%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.7848 78.48%
Acute Oral Toxicity (c) III 0.5897 58.97%
Estrogen receptor binding + 0.5363 53.63%
Androgen receptor binding + 0.6607 66.07%
Thyroid receptor binding + 0.5252 52.52%
Glucocorticoid receptor binding + 0.6847 68.47%
Aromatase binding - 0.5731 57.31%
PPAR gamma - 0.4852 48.52%
Honey bee toxicity - 0.9339 93.39%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity - 0.8001 80.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.36% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.53% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.86% 95.56%
CHEMBL299 P17252 Protein kinase C alpha 88.78% 98.03%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 88.28% 93.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.03% 91.11%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 87.33% 90.24%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.96% 97.25%
CHEMBL1937 Q92769 Histone deacetylase 2 84.19% 94.75%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.58% 90.71%
CHEMBL5103 Q969S8 Histone deacetylase 10 82.74% 90.08%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.50% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.32% 86.33%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.16% 100.00%
CHEMBL4588 P22894 Matrix metalloproteinase 8 80.91% 94.66%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.47% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139585714
LOTUS LTS0037968
wikiData Q77489979