Pelgipeptin B

Details

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Internal ID 339a8e54-d7b6-40f4-be85-1dced4db0904
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name 12,21,27-tris(2-aminoethyl)-18-benzyl-24-butan-2-yl-3-(hydroxymethyl)-6,15-bis(2-methylpropyl)-9,31-di(propan-2-yl)-1-oxa-4,7,10,13,16,19,22,25,28-nonazacyclohentriacontane-2,5,8,11,14,17,20,23,26,29-decone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C53H90N12O12/c1-11-32(10)44-52(75)59-35(18-21-55)45(68)61-39(25-33-15-13-12-14-16-33)50(73)60-37(23-28(2)3)48(71)58-36(19-22-56)47(70)64-43(31(8)9)51(74)62-38(24-29(4)5)49(72)63-40(27-66)53(76)77-41(30(6)7)26-42(67)57-34(17-20-54)46(69)65-44/h12-16,28-32,34-41,43-44,66H,11,17-27,54-56H2,1-10H3,(H,57,67)(H,58,71)(H,59,75)(H,60,73)(H,61,68)(H,62,74)(H,63,72)(H,64,70)(H,65,69)
InChI Key MPFVYQZRZAOSRX-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C53H90N12O12
Molecular Weight 1087.40 g/mol
Exact Mass 1086.68011635 g/mol
Topological Polar Surface Area (TPSA) 386.00 Ų
XlogP 2.10
Atomic LogP (AlogP) -1.60
H-Bond Acceptor 15
H-Bond Donor 13
Rotatable Bonds 17

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Pelgipeptin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7917 79.17%
Caco-2 - 0.8645 86.45%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.4813 48.13%
OATP2B1 inhibitior - 0.7170 71.70%
OATP1B1 inhibitior + 0.8699 86.99%
OATP1B3 inhibitior + 0.9209 92.09%
MATE1 inhibitior - 0.8812 88.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9541 95.41%
P-glycoprotein inhibitior + 0.7473 74.73%
P-glycoprotein substrate + 0.8235 82.35%
CYP3A4 substrate + 0.6272 62.72%
CYP2C9 substrate - 0.8047 80.47%
CYP2D6 substrate - 0.7735 77.35%
CYP3A4 inhibition - 0.7161 71.61%
CYP2C9 inhibition - 0.9374 93.74%
CYP2C19 inhibition - 0.9052 90.52%
CYP2D6 inhibition - 0.9316 93.16%
CYP1A2 inhibition - 0.9271 92.71%
CYP2C8 inhibition + 0.5073 50.73%
CYP inhibitory promiscuity - 0.9850 98.50%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.6588 65.88%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.8998 89.98%
Skin irritation - 0.7901 79.01%
Skin corrosion - 0.9346 93.46%
Ames mutagenesis - 0.7028 70.28%
Human Ether-a-go-go-Related Gene inhibition + 0.6798 67.98%
Micronuclear + 0.7400 74.00%
Hepatotoxicity + 0.5677 56.77%
skin sensitisation - 0.8708 87.08%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.6851 68.51%
Acute Oral Toxicity (c) III 0.6548 65.48%
Estrogen receptor binding + 0.7880 78.80%
Androgen receptor binding + 0.6828 68.28%
Thyroid receptor binding + 0.5379 53.79%
Glucocorticoid receptor binding + 0.6386 63.86%
Aromatase binding + 0.6558 65.58%
PPAR gamma + 0.8198 81.98%
Honey bee toxicity - 0.8043 80.43%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity - 0.5513 55.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.24% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.30% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.07% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.49% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.11% 91.11%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 92.99% 97.64%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.79% 85.14%
CHEMBL221 P23219 Cyclooxygenase-1 92.78% 90.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.29% 97.25%
CHEMBL220 P22303 Acetylcholinesterase 90.28% 94.45%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.87% 94.45%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 88.37% 91.71%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 87.80% 96.47%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.69% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 87.02% 94.73%
CHEMBL3492 P49721 Proteasome Macropain subunit 86.70% 90.24%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 85.61% 95.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.83% 99.17%
CHEMBL3837 P07711 Cathepsin L 84.48% 96.61%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.33% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.35% 97.14%
CHEMBL226 P30542 Adenosine A1 receptor 80.89% 95.93%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 80.79% 95.48%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139588811
LOTUS LTS0251659
wikiData Q104171942