Pelgipeptin A

Details

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Internal ID 0d36c7b6-e8e8-476f-817c-1adadc30b7ee
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name 12,21,27-tris(2-aminoethyl)-18-benzyl-3-(hydroxymethyl)-6,15-bis(2-methylpropyl)-9,24,31-tri(propan-2-yl)-1-oxa-4,7,10,13,16,19,22,25,28-nonazacyclohentriacontane-2,5,8,11,14,17,20,23,26,29-decone
SMILES (Canonical) CC(C)CC1C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)OC(CC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1)CC2=CC=CC=C2)CCN)C(C)C)CCN)C(C)C)CO)CC(C)C)C(C)C)CCN
SMILES (Isomeric) CC(C)CC1C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)OC(CC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1)CC2=CC=CC=C2)CCN)C(C)C)CCN)C(C)C)CO)CC(C)C)C(C)C)CCN
InChI InChI=1S/C52H88N12O12/c1-27(2)22-36-47(70)57-35(18-21-55)46(69)64-43(31(9)10)51(74)61-37(23-28(3)4)48(71)62-39(26-65)52(75)76-40(29(5)6)25-41(66)56-33(16-19-53)45(68)63-42(30(7)8)50(73)58-34(17-20-54)44(67)60-38(49(72)59-36)24-32-14-12-11-13-15-32/h11-15,27-31,33-40,42-43,65H,16-26,53-55H2,1-10H3,(H,56,66)(H,57,70)(H,58,73)(H,59,72)(H,60,67)(H,61,74)(H,62,71)(H,63,68)(H,64,69)
InChI Key BKXFLPALZOSCBA-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C52H88N12O12
Molecular Weight 1073.30 g/mol
Exact Mass 1072.66446629 g/mol
Topological Polar Surface Area (TPSA) 386.00 Ų
XlogP 1.80
Atomic LogP (AlogP) -1.99
H-Bond Acceptor 15
H-Bond Donor 13
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Pelgipeptin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6715 67.15%
Caco-2 - 0.8650 86.50%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.4955 49.55%
OATP2B1 inhibitior - 0.7164 71.64%
OATP1B1 inhibitior + 0.8965 89.65%
OATP1B3 inhibitior + 0.9266 92.66%
MATE1 inhibitior - 0.8812 88.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9502 95.02%
P-glycoprotein inhibitior + 0.7476 74.76%
P-glycoprotein substrate + 0.8082 80.82%
CYP3A4 substrate + 0.6022 60.22%
CYP2C9 substrate - 0.8047 80.47%
CYP2D6 substrate - 0.7735 77.35%
CYP3A4 inhibition - 0.8248 82.48%
CYP2C9 inhibition - 0.9508 95.08%
CYP2C19 inhibition - 0.9201 92.01%
CYP2D6 inhibition - 0.9412 94.12%
CYP1A2 inhibition - 0.9435 94.35%
CYP2C8 inhibition - 0.5789 57.89%
CYP inhibitory promiscuity - 0.9888 98.88%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8500 85.00%
Carcinogenicity (trinary) Non-required 0.6602 66.02%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9004 90.04%
Skin irritation - 0.7893 78.93%
Skin corrosion - 0.9360 93.60%
Ames mutagenesis - 0.7428 74.28%
Human Ether-a-go-go-Related Gene inhibition + 0.6660 66.60%
Micronuclear + 0.7400 74.00%
Hepatotoxicity + 0.5875 58.75%
skin sensitisation - 0.8726 87.26%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.6865 68.65%
Acute Oral Toxicity (c) III 0.6423 64.23%
Estrogen receptor binding + 0.7949 79.49%
Androgen receptor binding + 0.6889 68.89%
Thyroid receptor binding + 0.5468 54.68%
Glucocorticoid receptor binding + 0.6170 61.70%
Aromatase binding + 0.6594 65.94%
PPAR gamma + 0.8154 81.54%
Honey bee toxicity - 0.8518 85.18%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity - 0.6459 64.59%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.08% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.05% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.74% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.39% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.09% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.63% 97.09%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 92.32% 97.64%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.61% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.41% 97.25%
CHEMBL3401 O75469 Pregnane X receptor 87.19% 94.73%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.29% 96.47%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.80% 95.50%
CHEMBL221 P23219 Cyclooxygenase-1 84.49% 90.17%
CHEMBL226 P30542 Adenosine A1 receptor 84.12% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.95% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.94% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.84% 86.33%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 82.42% 91.71%
CHEMBL3837 P07711 Cathepsin L 82.03% 96.61%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.03% 97.14%
CHEMBL4040 P28482 MAP kinase ERK2 80.94% 83.82%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.62% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139588810
LOTUS LTS0032837
wikiData Q103816829