pelargonidin 3-O-rutinoside betaine

Details

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Internal ID 97b7efdf-de36-4e2b-b65a-d5205860bb8b
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 5-hydroxy-2-(4-hydroxyphenyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-7-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H30O14/c1-10-19(31)21(33)23(35)26(38-10)37-9-18-20(32)22(34)24(36)27(41-18)40-17-8-14-15(30)6-13(29)7-16(14)39-25(17)11-2-4-12(28)5-3-11/h2-8,10,18-24,26-28,30-36H,9H2,1H3/t10-,18+,19-,20+,21+,22-,23+,24+,26+,27+/m0/s1
InChI Key QCORKUZRFLLFCU-ASZXTAQUSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H30O14
Molecular Weight 578.50 g/mol
Exact Mass 578.16355563 g/mol
Topological Polar Surface Area (TPSA) 225.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -1.15
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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3-{[6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranosyl]oxy}-7-hydroxy-2-(4-hydroxyphenyl)chromenium-5-olate
3-{[6-O-(alpha-L-rhamnopyranosyl)-beta-D-glucopyranosyl]oxy}-7-hydroxy-2-(4-hydroxyphenyl)chromenium-5-olate
pelargonidin-3-O-rutinoside
pelargonidin-3-O-rhamnoglucoside
SCHEMBL30496550
CHEBI:60048
Q27127036
5-hydroxy-2-(4-hydroxyphenyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-7-one

2D Structure

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2D Structure of pelargonidin 3-O-rutinoside betaine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5842 58.42%
Caco-2 - 0.9105 91.05%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7477 74.77%
OATP2B1 inhibitior - 0.5648 56.48%
OATP1B1 inhibitior + 0.8766 87.66%
OATP1B3 inhibitior + 0.9304 93.04%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.7750 77.50%
P-glycoprotein inhibitior - 0.6486 64.86%
P-glycoprotein substrate - 0.5530 55.30%
CYP3A4 substrate + 0.6281 62.81%
CYP2C9 substrate - 0.7354 73.54%
CYP2D6 substrate - 0.8607 86.07%
CYP3A4 inhibition - 0.9249 92.49%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9545 95.45%
CYP1A2 inhibition - 0.8673 86.73%
CYP2C8 inhibition + 0.7433 74.33%
CYP inhibitory promiscuity - 0.6787 67.87%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6741 67.41%
Eye corrosion - 0.9905 99.05%
Eye irritation - 0.9137 91.37%
Skin irritation - 0.7913 79.13%
Skin corrosion - 0.9567 95.67%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4103 41.03%
Micronuclear + 0.6551 65.51%
Hepatotoxicity - 0.7074 70.74%
skin sensitisation - 0.9085 90.85%
Respiratory toxicity - 0.6556 65.56%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.7920 79.20%
Acute Oral Toxicity (c) III 0.5971 59.71%
Estrogen receptor binding + 0.7531 75.31%
Androgen receptor binding + 0.5930 59.30%
Thyroid receptor binding + 0.5415 54.15%
Glucocorticoid receptor binding + 0.5854 58.54%
Aromatase binding + 0.6385 63.85%
PPAR gamma + 0.7176 71.76%
Honey bee toxicity - 0.7731 77.31%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6099 60.99%
Fish aquatic toxicity + 0.8052 80.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.38% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.91% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.84% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.82% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.38% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.12% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.01% 99.17%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.27% 99.15%
CHEMBL3401 O75469 Pregnane X receptor 90.25% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.31% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.80% 95.56%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 85.79% 95.78%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.15% 96.95%
CHEMBL3194 P02766 Transthyretin 84.50% 90.71%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.29% 97.36%
CHEMBL1951 P21397 Monoamine oxidase A 83.35% 91.49%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.96% 95.64%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.51% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.39% 95.89%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.43% 91.71%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.35% 95.83%
CHEMBL1937 Q92769 Histone deacetylase 2 80.50% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.32% 97.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rubus chingii
Rubus coreanus

Cross-Links

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PubChem 443918
NPASS NPC27683