Pelargonidin 3-lathyroside

Details

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Internal ID b61e3ce0-6482-4b2b-bfd6-49519e548588
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name (2S,3R,5R)-2-[(2S,5R)-2-[5,7-dihydroxy-2-(4-hydroxyphenyl)chromenylium-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxyoxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H28O14/c27-8-18-20(33)21(34)24(40-25-22(35)19(32)15(31)9-36-25)26(39-18)38-17-7-13-14(30)5-12(29)6-16(13)37-23(17)10-1-3-11(28)4-2-10/h1-7,15,18-22,24-27,31-35H,8-9H2,(H2-,28,29,30)/p+1/t15-,18?,19?,20+,21?,22-,24?,25+,26-/m1/s1
InChI Key NKUOSFBSKVBOJC-HVHHODJLSA-O
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C26H29O14+
Molecular Weight 565.50 g/mol
Exact Mass 565.15573059 g/mol
Topological Polar Surface Area (TPSA) 220.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.86
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 6

Synonyms

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CHEBI:187655
LMPK12010008
(2S,3R,5R)-2-[(2S,5R)-2-[5,7-dihydroxy-2-(4-hydroxyphenyl)chromenylium-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxyoxane-3,4,5-triol

2D Structure

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2D Structure of Pelargonidin 3-lathyroside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8094 80.94%
Caco-2 - 0.9203 92.03%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Nucleus 0.4922 49.22%
OATP2B1 inhibitior - 0.5608 56.08%
OATP1B1 inhibitior + 0.8907 89.07%
OATP1B3 inhibitior + 0.9359 93.59%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.7407 74.07%
P-glycoprotein inhibitior - 0.6064 60.64%
P-glycoprotein substrate - 0.6582 65.82%
CYP3A4 substrate + 0.6455 64.55%
CYP2C9 substrate - 0.8053 80.53%
CYP2D6 substrate - 0.8220 82.20%
CYP3A4 inhibition - 0.9674 96.74%
CYP2C9 inhibition - 0.9451 94.51%
CYP2C19 inhibition - 0.8795 87.95%
CYP2D6 inhibition - 0.8992 89.92%
CYP1A2 inhibition - 0.9079 90.79%
CYP2C8 inhibition + 0.7740 77.40%
CYP inhibitory promiscuity - 0.8848 88.48%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6278 62.78%
Eye corrosion - 0.9930 99.30%
Eye irritation - 0.8973 89.73%
Skin irritation - 0.8130 81.30%
Skin corrosion - 0.9616 96.16%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4637 46.37%
Micronuclear + 0.6259 62.59%
Hepatotoxicity - 0.7498 74.98%
skin sensitisation - 0.9039 90.39%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9396 93.96%
Acute Oral Toxicity (c) III 0.4867 48.67%
Estrogen receptor binding + 0.8324 83.24%
Androgen receptor binding + 0.6479 64.79%
Thyroid receptor binding + 0.6446 64.46%
Glucocorticoid receptor binding + 0.5628 56.28%
Aromatase binding + 0.7517 75.17%
PPAR gamma + 0.8179 81.79%
Honey bee toxicity - 0.7175 71.75%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.6534 65.34%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.56% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.90% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.80% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.71% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.75% 94.00%
CHEMBL2581 P07339 Cathepsin D 92.13% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.85% 92.94%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 91.73% 95.78%
CHEMBL1937 Q92769 Histone deacetylase 2 89.82% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.51% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.32% 99.15%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 87.57% 95.83%
CHEMBL242 Q92731 Estrogen receptor beta 87.41% 98.35%
CHEMBL226 P30542 Adenosine A1 receptor 87.22% 95.93%
CHEMBL205 P00918 Carbonic anhydrase II 87.07% 98.44%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.31% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.93% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.73% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.29% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.17% 86.92%
CHEMBL4208 P20618 Proteasome component C5 81.88% 90.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.77% 89.62%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.20% 93.10%
CHEMBL6175 Q9H3R0 Lysine-specific demethylase 4C 80.72% 96.69%
CHEMBL3891 P07384 Calpain 1 80.67% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Anemone coronaria

Cross-Links

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PubChem 44256613
LOTUS LTS0018411
wikiData Q105181151