Patriridoside I

Details

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Internal ID 42bcb5a6-bbba-4b48-bb03-8c4573eafb74
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2R,3R,4S,5S,6R)-2-[[(3S,3aR,6aS)-3,6-dimethyl-2,3,3a,4-tetrahydrocyclopenta[b]furan-6a-yl]methoxy]-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]oxane-3,4,5-triol
SMILES (Canonical) CC1COC2(C1CC=C2C)COC3C(C(C(C(O3)COC4C(C(CO4)(CO)O)O)O)O)O
SMILES (Isomeric) C[C@@H]1CO[C@]2([C@@H]1CC=C2C)CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO[C@H]4[C@@H]([C@](CO4)(CO)O)O)O)O)O
InChI InChI=1S/C21H34O11/c1-10-5-31-21(11(2)3-4-12(10)21)9-30-18-16(25)15(24)14(23)13(32-18)6-28-19-17(26)20(27,7-22)8-29-19/h3,10,12-19,22-27H,4-9H2,1-2H3/t10-,12-,13-,14-,15+,16-,17+,18-,19-,20-,21-/m1/s1
InChI Key RKKLMLPXHGWOKI-FXHXVMKNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H34O11
Molecular Weight 462.50 g/mol
Exact Mass 462.21011190 g/mol
Topological Polar Surface Area (TPSA) 168.00 Ų
XlogP -2.70
Atomic LogP (AlogP) -2.36
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 7

Synonyms

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CHEMBL2152447

2D Structure

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2D Structure of Patriridoside I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6475 64.75%
Caco-2 - 0.8316 83.16%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6481 64.81%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8964 89.64%
OATP1B3 inhibitior + 0.9567 95.67%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.7932 79.32%
P-glycoprotein inhibitior - 0.7079 70.79%
P-glycoprotein substrate - 0.6712 67.12%
CYP3A4 substrate + 0.6474 64.74%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8447 84.47%
CYP3A4 inhibition - 0.9410 94.10%
CYP2C9 inhibition - 0.9212 92.12%
CYP2C19 inhibition - 0.9066 90.66%
CYP2D6 inhibition - 0.9337 93.37%
CYP1A2 inhibition - 0.8721 87.21%
CYP2C8 inhibition - 0.5597 55.97%
CYP inhibitory promiscuity - 0.9339 93.39%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9905 99.05%
Eye irritation - 0.9663 96.63%
Skin irritation - 0.6806 68.06%
Skin corrosion - 0.9487 94.87%
Ames mutagenesis + 0.6146 61.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7912 79.12%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7518 75.18%
skin sensitisation - 0.8907 89.07%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.8123 81.23%
Acute Oral Toxicity (c) I 0.6025 60.25%
Estrogen receptor binding + 0.6283 62.83%
Androgen receptor binding + 0.5940 59.40%
Thyroid receptor binding - 0.5110 51.10%
Glucocorticoid receptor binding + 0.5690 56.90%
Aromatase binding + 0.7179 71.79%
PPAR gamma + 0.5984 59.84%
Honey bee toxicity - 0.7610 76.10%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.8843 88.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.10% 83.82%
CHEMBL226 P30542 Adenosine A1 receptor 96.97% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.46% 91.11%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 92.16% 97.21%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.26% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 89.39% 94.73%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.49% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.38% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.83% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.61% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.36% 94.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.63% 97.25%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.57% 97.36%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.35% 95.89%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.22% 96.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.45% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 84.39% 96.90%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.64% 96.61%
CHEMBL2581 P07339 Cathepsin D 82.75% 98.95%
CHEMBL4581 P52732 Kinesin-like protein 1 82.01% 93.18%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.56% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Patrinia scabra

Cross-Links

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PubChem 71458434
NPASS NPC249408
ChEMBL CHEMBL2152447