Paromomycin I

Details

Top
Internal ID b7396116-5684-4ba1-b0d0-0a9ddf2641a7
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > 2-deoxystreptamine aminoglycosides > 4,5-disubstituted 2-deoxystreptamines
IUPAC Name 5-amino-2-(aminomethyl)-6-[5-[3,5-diamino-2-[3-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-hydroxycyclohexyl]oxy-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]oxyoxane-3,4-diol
SMILES (Canonical) C1C(C(C(C(C1N)OC2C(C(C(C(O2)CO)O)O)N)OC3C(C(C(O3)CO)OC4C(C(C(C(O4)CN)O)O)N)O)O)N
SMILES (Isomeric) C1C(C(C(C(C1N)OC2C(C(C(C(O2)CO)O)O)N)OC3C(C(C(O3)CO)OC4C(C(C(C(O4)CN)O)O)N)O)O)N
InChI InChI=1S/C23H45N5O14/c24-2-7-13(32)15(34)10(27)21(37-7)41-19-9(4-30)39-23(17(19)36)42-20-12(31)5(25)1-6(26)18(20)40-22-11(28)16(35)14(33)8(3-29)38-22/h5-23,29-36H,1-4,24-28H2
InChI Key UOZODPSAJZTQNH-UHFFFAOYSA-N
Popularity 1,390 references in papers

Physical and Chemical Properties

Top
Molecular Formula C23H45N5O14
Molecular Weight 615.60 g/mol
Exact Mass 615.29630113 g/mol
Topological Polar Surface Area (TPSA) 347.00 Ų
XlogP -8.70
Atomic LogP (AlogP) -8.86
H-Bond Acceptor 19
H-Bond Donor 13
Rotatable Bonds 9

Synonyms

Top
Amminosidin
Humycin
Aminosidine I
Antibiotic 2230D
SF 767B; Catenulin; Crestomycin; Gabbromicina
SCHEMBL2736467
DTXSID80859614
UOZODPSAJZTQNH-UHFFFAOYSA-N
5-amino-2-(aminomethyl)-6-[5-[3,5-diamino-2-[3-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-hydroxycyclohexyl]oxy-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]oxyoxane-3,4-diol
NCI60_001857
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Paromomycin I

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9690 96.90%
Caco-2 - 0.8869 88.69%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 1.0000 100.00%
Subcellular localzation Lysosomes 0.5216 52.16%
OATP2B1 inhibitior - 0.8639 86.39%
OATP1B1 inhibitior + 0.9428 94.28%
OATP1B3 inhibitior + 0.9492 94.92%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.8667 86.67%
P-glycoprotein inhibitior - 0.9166 91.66%
P-glycoprotein substrate - 0.8726 87.26%
CYP3A4 substrate + 0.5401 54.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7688 76.88%
CYP3A4 inhibition - 0.9471 94.71%
CYP2C9 inhibition - 0.9147 91.47%
CYP2C19 inhibition - 0.9034 90.34%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9157 91.57%
CYP2C8 inhibition - 0.7187 71.87%
CYP inhibitory promiscuity - 0.8446 84.46%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6540 65.40%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9184 91.84%
Skin irritation - 0.7944 79.44%
Skin corrosion - 0.9205 92.05%
Ames mutagenesis - 0.6754 67.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7754 77.54%
Micronuclear + 0.7800 78.00%
Hepatotoxicity - 0.9750 97.50%
skin sensitisation - 0.9435 94.35%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 1.0000 100.00%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.8449 84.49%
Acute Oral Toxicity (c) IV 0.6098 60.98%
Estrogen receptor binding + 0.5396 53.96%
Androgen receptor binding - 0.7562 75.62%
Thyroid receptor binding + 0.5290 52.90%
Glucocorticoid receptor binding + 0.5373 53.73%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6201 62.01%
Honey bee toxicity - 0.6582 65.82%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity - 0.9655 96.55%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 97.46% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.07% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 94.92% 95.93%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 92.83% 95.58%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.64% 96.09%
CHEMBL2996 Q05655 Protein kinase C delta 91.03% 97.79%
CHEMBL3589 P55263 Adenosine kinase 85.61% 98.05%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.94% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.16% 94.45%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.75% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.27% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.26% 95.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 4689
LOTUS LTS0142951
wikiData Q105276652