Paecilodepsipeptide D

Details

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Internal ID 2114a5c2-c463-4255-a489-60be42285ec5
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (3R,6R,9R,15S,18S)-18-benzyl-3,9-bis[(4-hydroxyphenyl)methyl]-6,15-dimethyl-1-oxa-4,7,10,13,16-pentazacyclooctadecane-2,5,8,11,14,17-hexone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C35H39N5O9/c1-20-31(44)36-19-30(43)39-27(16-23-8-12-25(41)13-9-23)33(46)37-21(2)32(45)40-28(17-24-10-14-26(42)15-11-24)35(48)49-29(34(47)38-20)18-22-6-4-3-5-7-22/h3-15,20-21,27-29,41-42H,16-19H2,1-2H3,(H,36,44)(H,37,46)(H,38,47)(H,39,43)(H,40,45)/t20-,21+,27+,28+,29-/m0/s1
InChI Key PELFOKHAMGLCNX-TXANTADJSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C35H39N5O9
Molecular Weight 673.70 g/mol
Exact Mass 673.27477784 g/mol
Topological Polar Surface Area (TPSA) 212.00 Ų
XlogP 2.70
Atomic LogP (AlogP) 0.15
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Paecilodepsipeptide D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5000 50.00%
Caco-2 - 0.8774 87.74%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.6239 62.39%
OATP2B1 inhibitior - 0.5646 56.46%
OATP1B1 inhibitior + 0.8103 81.03%
OATP1B3 inhibitior + 0.9338 93.38%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9550 95.50%
P-glycoprotein inhibitior + 0.7980 79.80%
P-glycoprotein substrate + 0.7931 79.31%
CYP3A4 substrate + 0.6104 61.04%
CYP2C9 substrate - 0.6261 62.61%
CYP2D6 substrate - 0.8321 83.21%
CYP3A4 inhibition - 0.9087 90.87%
CYP2C9 inhibition - 0.8913 89.13%
CYP2C19 inhibition - 0.8922 89.22%
CYP2D6 inhibition - 0.9436 94.36%
CYP1A2 inhibition - 0.9324 93.24%
CYP2C8 inhibition + 0.6904 69.04%
CYP inhibitory promiscuity - 0.9327 93.27%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.7800 78.00%
Carcinogenicity (trinary) Non-required 0.6603 66.03%
Eye corrosion - 0.9940 99.40%
Eye irritation - 0.9320 93.20%
Skin irritation - 0.7833 78.33%
Skin corrosion - 0.9498 94.98%
Ames mutagenesis - 0.6654 66.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8928 89.28%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.8913 89.13%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.5724 57.24%
Acute Oral Toxicity (c) III 0.6543 65.43%
Estrogen receptor binding + 0.7414 74.14%
Androgen receptor binding + 0.8371 83.71%
Thyroid receptor binding + 0.6004 60.04%
Glucocorticoid receptor binding + 0.6438 64.38%
Aromatase binding - 0.5204 52.04%
PPAR gamma + 0.7514 75.14%
Honey bee toxicity - 0.8648 86.48%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity - 0.3838 38.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.05% 98.95%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 96.14% 93.10%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.43% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.89% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.85% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.05% 96.09%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 91.61% 91.71%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 91.56% 97.64%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 89.79% 90.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.41% 86.33%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 85.55% 95.50%
CHEMBL3401 O75469 Pregnane X receptor 85.32% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 83.16% 95.93%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.74% 90.08%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.18% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.37% 94.00%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 80.11% 92.67%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 146682537
LOTUS LTS0043791
wikiData Q105207168