Pactamide A

Details

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Internal ID 6b4cf5b0-bb00-417c-8af9-3e443e1b96f6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids
IUPAC Name (3E,5R,8S,9R,10R,11S,13S,15S,16R,18Z,25S)-11-ethyl-2-hydroxy-10-methyl-21,26-diazapentacyclo[23.2.1.05,16.08,15.09,13]octacosa-1,3,18-triene-20,27,28-trione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H40N2O4/c1-3-17-14-19-15-22-20-6-4-8-25(33)30-13-5-7-23-28(34)27(29(35)31-23)24(32)12-10-18(20)9-11-21(22)26(19)16(17)2/h4,8,10,12,16-23,26,32H,3,5-7,9,11,13-15H2,1-2H3,(H,30,33)(H,31,35)/b8-4-,12-10+,27-24?/t16-,17+,18-,19+,20-,21+,22+,23+,26+/m1/s1
InChI Key COQRMMDQXCDULZ-BZXIHHRZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H40N2O4
Molecular Weight 480.60 g/mol
Exact Mass 480.29880776 g/mol
Topological Polar Surface Area (TPSA) 95.50 Ų
XlogP 5.60
Atomic LogP (AlogP) 4.24
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Pactamide A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9810 98.10%
Caco-2 - 0.8015 80.15%
Blood Brain Barrier - 0.5879 58.79%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.8565 85.65%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8242 82.42%
OATP1B3 inhibitior + 0.9326 93.26%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7567 75.67%
BSEP inhibitior + 0.5980 59.80%
P-glycoprotein inhibitior + 0.6213 62.13%
P-glycoprotein substrate + 0.7219 72.19%
CYP3A4 substrate + 0.6638 66.38%
CYP2C9 substrate - 0.8099 80.99%
CYP2D6 substrate - 0.8930 89.30%
CYP3A4 inhibition - 0.9497 94.97%
CYP2C9 inhibition - 0.8457 84.57%
CYP2C19 inhibition - 0.8871 88.71%
CYP2D6 inhibition - 0.8839 88.39%
CYP1A2 inhibition - 0.7922 79.22%
CYP2C8 inhibition + 0.4590 45.90%
CYP inhibitory promiscuity - 0.7782 77.82%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5801 58.01%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9698 96.98%
Skin irritation - 0.7469 74.69%
Skin corrosion - 0.9288 92.88%
Ames mutagenesis - 0.6224 62.24%
Human Ether-a-go-go-Related Gene inhibition - 0.4653 46.53%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.5875 58.75%
skin sensitisation - 0.8607 86.07%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.7034 70.34%
Acute Oral Toxicity (c) III 0.6074 60.74%
Estrogen receptor binding + 0.7432 74.32%
Androgen receptor binding + 0.8027 80.27%
Thyroid receptor binding - 0.5230 52.30%
Glucocorticoid receptor binding + 0.6469 64.69%
Aromatase binding + 0.5238 52.38%
PPAR gamma + 0.5223 52.23%
Honey bee toxicity - 0.8347 83.47%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.7919 79.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.58% 97.25%
CHEMBL1937 Q92769 Histone deacetylase 2 96.87% 94.75%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.82% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.59% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.56% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.71% 97.09%
CHEMBL5103 Q969S8 Histone deacetylase 10 94.08% 90.08%
CHEMBL325 Q13547 Histone deacetylase 1 93.35% 95.92%
CHEMBL255 P29275 Adenosine A2b receptor 90.06% 98.59%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 87.48% 93.03%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 85.95% 82.69%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.83% 100.00%
CHEMBL1978 P11511 Cytochrome P450 19A1 85.72% 91.76%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.99% 92.94%
CHEMBL3310 Q96DB2 Histone deacetylase 11 82.68% 88.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.53% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.34% 89.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 81.81% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.25% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.37% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 146684575
LOTUS LTS0092880
wikiData Q104967234