Pacinine

Details

Top
Internal ID d88eb437-1298-455c-88ab-aa54d2916e3d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Aconitane-type diterpenoid alkaloids
IUPAC Name (1S,2R,3R,4S,5R,6S,8R,12S,13S,16R,19S,20R)-14-ethyl-4,6,19-trimethoxy-16-methyl-9,11-dioxa-14-azaheptacyclo[10.7.2.12,5.01,13.03,8.08,12.016,20]docosan-21-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H37NO6/c1-6-26-11-22(2)8-7-16(29-4)24-14-9-13-15(28-3)10-23(17(14)18(13)30-5)25(21(24)26,32-12-31-23)20(27)19(22)24/h13-19,21H,6-12H2,1-5H3/t13-,14-,15+,16+,17-,18+,19-,21+,22+,23-,24+,25+/m1/s1
InChI Key FTEXZAOPVCNOHP-NXHWWDTFSA-N
Popularity 5 references in papers

Physical and Chemical Properties

Top
Molecular Formula C25H37NO6
Molecular Weight 447.60 g/mol
Exact Mass 447.26208790 g/mol
Topological Polar Surface Area (TPSA) 66.50 Ų
XlogP 1.20
Atomic LogP (AlogP) 1.87
H-Bond Acceptor 7
H-Bond Donor 0
Rotatable Bonds 4

Synonyms

Top
CHEMBL1935118

2D Structure

Top
2D Structure of Pacinine

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7711 77.11%
Caco-2 + 0.6481 64.81%
Blood Brain Barrier + 0.8750 87.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Lysosomes 0.5353 53.53%
OATP2B1 inhibitior - 0.8593 85.93%
OATP1B1 inhibitior + 0.8735 87.35%
OATP1B3 inhibitior + 0.9491 94.91%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.6037 60.37%
P-glycoprotein inhibitior - 0.6639 66.39%
P-glycoprotein substrate + 0.5423 54.23%
CYP3A4 substrate + 0.7107 71.07%
CYP2C9 substrate - 0.8163 81.63%
CYP2D6 substrate - 0.6904 69.04%
CYP3A4 inhibition - 0.8302 83.02%
CYP2C9 inhibition - 0.9171 91.71%
CYP2C19 inhibition - 0.8740 87.40%
CYP2D6 inhibition - 0.8905 89.05%
CYP1A2 inhibition - 0.8854 88.54%
CYP2C8 inhibition + 0.5816 58.16%
CYP inhibitory promiscuity - 0.8398 83.98%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5340 53.40%
Eye corrosion - 0.9868 98.68%
Eye irritation - 0.9073 90.73%
Skin irritation - 0.8119 81.19%
Skin corrosion - 0.9347 93.47%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7114 71.14%
Micronuclear - 0.5400 54.00%
Hepatotoxicity - 0.6768 67.68%
skin sensitisation - 0.8487 84.87%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity + 0.5242 52.42%
Acute Oral Toxicity (c) III 0.6138 61.38%
Estrogen receptor binding + 0.8227 82.27%
Androgen receptor binding + 0.7817 78.17%
Thyroid receptor binding + 0.7223 72.23%
Glucocorticoid receptor binding + 0.5706 57.06%
Aromatase binding + 0.6112 61.12%
PPAR gamma + 0.6481 64.81%
Honey bee toxicity - 0.5928 59.28%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.6500 65.00%
Fish aquatic toxicity - 0.4190 41.90%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.60% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.76% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.21% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.48% 94.45%
CHEMBL230 P35354 Cyclooxygenase-2 91.45% 89.63%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.24% 86.33%
CHEMBL204 P00734 Thrombin 89.97% 96.01%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.24% 91.11%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.35% 97.14%
CHEMBL1871 P10275 Androgen Receptor 88.02% 96.43%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.88% 96.77%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 87.51% 92.62%
CHEMBL3922 P50579 Methionine aminopeptidase 2 87.00% 97.28%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.16% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.13% 94.00%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 84.20% 94.78%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.95% 93.04%
CHEMBL2581 P07339 Cathepsin D 83.65% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.52% 92.94%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.41% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 82.16% 92.50%
CHEMBL3820 P35557 Hexokinase type IV 82.01% 91.96%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.54% 99.23%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Delphinium elatum
Isodon lophanthoides

Cross-Links

Top
PubChem 57392358
LOTUS LTS0172240
wikiData Q105238407