(3S,5S,6S,8S,9R,10S,13R,14S,15S,17R)-17-[(2R,5S)-5-[(2R,3R,4S,5S)-5-(hydroxymethyl)-4-methoxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxolan-2-yl]oxy-6-methylheptan-2-yl]-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol

Details

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Internal ID da07af98-d3b0-4de3-8256-38a7d131f8f7
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (3S,5S,6S,8S,9R,10S,13R,14S,15S,17R)-17-[(2R,5S)-5-[(2R,3R,4S,5S)-5-(hydroxymethyl)-4-methoxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxolan-2-yl]oxy-6-methylheptan-2-yl]-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C38H66O13/c1-18(2)26(49-35-32(31(47-6)27(16-39)50-35)51-34-30(45)29(44)25(43)17-48-34)8-7-19(3)21-14-23(41)33-37(21,5)12-10-28-36(4)11-9-20(40)13-22(36)24(42)15-38(28,33)46/h18-35,39-46H,7-17H2,1-6H3/t19-,20+,21-,22-,23+,24+,25-,26+,27+,28-,29+,30-,31+,32-,33-,34+,35-,36+,37-,38+/m1/s1
InChI Key LYXVAVKGLCCHOP-KMNBBHNVSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C38H66O13
Molecular Weight 730.90 g/mol
Exact Mass 730.45034216 g/mol
Topological Polar Surface Area (TPSA) 208.00 Ų
XlogP 1.40
Atomic LogP (AlogP) 1.08
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,5S,6S,8S,9R,10S,13R,14S,15S,17R)-17-[(2R,5S)-5-[(2R,3R,4S,5S)-5-(hydroxymethyl)-4-methoxy-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxolan-2-yl]oxy-6-methylheptan-2-yl]-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthrene-3,6,8,15-tetrol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4742 47.42%
Caco-2 - 0.8754 87.54%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6600 66.00%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8290 82.90%
OATP1B3 inhibitior + 0.9327 93.27%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior - 0.7387 73.87%
P-glycoprotein inhibitior + 0.7195 71.95%
P-glycoprotein substrate + 0.6421 64.21%
CYP3A4 substrate + 0.7448 74.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8413 84.13%
CYP3A4 inhibition - 0.9428 94.28%
CYP2C9 inhibition - 0.8777 87.77%
CYP2C19 inhibition - 0.8820 88.20%
CYP2D6 inhibition - 0.9484 94.84%
CYP1A2 inhibition - 0.9221 92.21%
CYP2C8 inhibition + 0.5725 57.25%
CYP inhibitory promiscuity - 0.9645 96.45%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6193 61.93%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9169 91.69%
Skin irritation - 0.7214 72.14%
Skin corrosion - 0.9502 95.02%
Ames mutagenesis - 0.6178 61.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7452 74.52%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.8295 82.95%
skin sensitisation - 0.9215 92.15%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7955 79.55%
Acute Oral Toxicity (c) I 0.6583 65.83%
Estrogen receptor binding + 0.6554 65.54%
Androgen receptor binding + 0.6964 69.64%
Thyroid receptor binding - 0.6200 62.00%
Glucocorticoid receptor binding - 0.5211 52.11%
Aromatase binding + 0.6122 61.22%
PPAR gamma + 0.6599 65.99%
Honey bee toxicity - 0.6144 61.44%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.6851 68.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.91% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 97.80% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.28% 91.11%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 97.18% 95.58%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.09% 97.25%
CHEMBL233 P35372 Mu opioid receptor 96.45% 97.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.28% 97.09%
CHEMBL204 P00734 Thrombin 94.57% 96.01%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.64% 94.45%
CHEMBL237 P41145 Kappa opioid receptor 92.42% 98.10%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.75% 95.89%
CHEMBL4040 P28482 MAP kinase ERK2 91.11% 83.82%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.82% 97.14%
CHEMBL4581 P52732 Kinesin-like protein 1 88.61% 93.18%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.54% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.25% 100.00%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 87.29% 92.78%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.17% 96.61%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 87.10% 92.86%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.36% 95.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 85.63% 100.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.19% 100.00%
CHEMBL268 P43235 Cathepsin K 85.14% 96.85%
CHEMBL2581 P07339 Cathepsin D 84.82% 98.95%
CHEMBL1937 Q92769 Histone deacetylase 2 83.93% 94.75%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.24% 97.28%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 82.68% 95.36%
CHEMBL242 Q92731 Estrogen receptor beta 82.55% 98.35%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 82.17% 97.29%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 81.92% 95.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.17% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 15226012
LOTUS LTS0035809
wikiData Q105159664