Orcinol glucoside

Details

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Internal ID 765e357f-3f5c-4eab-a58c-563ca685fae5
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(3-hydroxy-5-methylphenoxy)oxane-3,4,5-triol
SMILES (Canonical) CC1=CC(=CC(=C1)OC2C(C(C(C(O2)CO)O)O)O)O
SMILES (Isomeric) CC1=CC(=CC(=C1)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O
InChI InChI=1S/C13H18O7/c1-6-2-7(15)4-8(3-6)19-13-12(18)11(17)10(16)9(5-14)20-13/h2-4,9-18H,5H2,1H3/t9-,10-,11+,12-,13-/m1/s1
InChI Key YTXIGTCAQNODGD-UJPOAAIJSA-N
Popularity 13 references in papers

Physical and Chemical Properties

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Molecular Formula C13H18O7
Molecular Weight 286.28 g/mol
Exact Mass 286.10525291 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -1.12
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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21082-33-7
(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-(3-hydroxy-5-methylphenoxy)oxane-3,4,5-triol
RefChem:1093899
Sakakin
ORCINOLGLUCOSIDE
beta-D-Glucopyranoside, 3-hydroxy-5-methylphenyl
MFCD06794970
Orcinol glucoside (Standard)
SCHEMBL2997824
CHEMBL2425246
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Orcinol glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8305 83.05%
Caco-2 - 0.8116 81.16%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7167 71.67%
OATP2B1 inhibitior - 0.8610 86.10%
OATP1B1 inhibitior + 0.9287 92.87%
OATP1B3 inhibitior + 0.9565 95.65%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9597 95.97%
P-glycoprotein inhibitior - 0.9582 95.82%
P-glycoprotein substrate - 0.9737 97.37%
CYP3A4 substrate - 0.5347 53.47%
CYP2C9 substrate - 0.8019 80.19%
CYP2D6 substrate - 0.8226 82.26%
CYP3A4 inhibition - 0.8979 89.79%
CYP2C9 inhibition - 0.8918 89.18%
CYP2C19 inhibition - 0.9148 91.48%
CYP2D6 inhibition - 0.9455 94.55%
CYP1A2 inhibition - 0.9283 92.83%
CYP2C8 inhibition - 0.7921 79.21%
CYP inhibitory promiscuity - 0.6731 67.31%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6437 64.37%
Eye corrosion - 0.9925 99.25%
Eye irritation - 0.9522 95.22%
Skin irritation - 0.8449 84.49%
Skin corrosion - 0.9645 96.45%
Ames mutagenesis - 0.7500 75.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5536 55.36%
Micronuclear - 0.5941 59.41%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.8862 88.62%
Respiratory toxicity - 0.7778 77.78%
Reproductive toxicity - 0.5111 51.11%
Mitochondrial toxicity - 0.8625 86.25%
Nephrotoxicity - 0.6171 61.71%
Acute Oral Toxicity (c) III 0.7517 75.17%
Estrogen receptor binding - 0.8337 83.37%
Androgen receptor binding - 0.6943 69.43%
Thyroid receptor binding - 0.5159 51.59%
Glucocorticoid receptor binding - 0.5911 59.11%
Aromatase binding - 0.6938 69.38%
PPAR gamma + 0.5931 59.31%
Honey bee toxicity - 0.8346 83.46%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.5188 51.88%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.23% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 93.96% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.12% 96.09%
CHEMBL2581 P07339 Cathepsin D 90.38% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.00% 99.17%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.72% 94.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.20% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.62% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.59% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.55% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.83% 89.00%
CHEMBL4208 P20618 Proteasome component C5 81.79% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.73% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.64% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Curculigo breviscapa
Curculigo orchioides
Helichrysum arenarium

Cross-Links

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PubChem 12315192
NPASS NPC12308
LOTUS LTS0073520
wikiData Q104399438