Orcinol gentiobioside

Details

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Internal ID 8de16b04-01f9-4d9e-9a28-8d9a60542d20
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-(3-hydroxy-5-methylphenoxy)oxan-2-yl]methoxy]oxane-3,4,5-triol
SMILES (Canonical) CC1=CC(=CC(=C1)OC2C(C(C(C(O2)COC3C(C(C(C(O3)CO)O)O)O)O)O)O)O
SMILES (Isomeric) CC1=CC(=CC(=C1)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O)O
InChI InChI=1S/C19H28O12/c1-7-2-8(21)4-9(3-7)29-19-17(27)15(25)13(23)11(31-19)6-28-18-16(26)14(24)12(22)10(5-20)30-18/h2-4,10-27H,5-6H2,1H3/t10-,11-,12-,13-,14+,15+,16-,17-,18-,19-/m1/s1
InChI Key XZPNBJLXZMBECP-SKYGPZSASA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C19H28O12
Molecular Weight 448.40 g/mol
Exact Mass 448.15807632 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -2.40
Atomic LogP (AlogP) -3.30
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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164991-86-0
Anacardoside
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-(3-hydroxy-5-methylphenoxy)oxan-2-yl]methoxy]oxane-3,4,5-triol
Orcinolgentiobioside
HY-N4123
AKOS037514762
MS-28118
CS-0032137

2D Structure

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2D Structure of Orcinol gentiobioside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9087 90.87%
Caco-2 - 0.8784 87.84%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7105 71.05%
OATP2B1 inhibitior - 0.8604 86.04%
OATP1B1 inhibitior + 0.9201 92.01%
OATP1B3 inhibitior + 0.9645 96.45%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.6468 64.68%
P-glycoprotein inhibitior - 0.8545 85.45%
P-glycoprotein substrate - 0.9385 93.85%
CYP3A4 substrate + 0.5112 51.12%
CYP2C9 substrate - 0.8019 80.19%
CYP2D6 substrate - 0.8226 82.26%
CYP3A4 inhibition - 0.9502 95.02%
CYP2C9 inhibition - 0.9212 92.12%
CYP2C19 inhibition - 0.9241 92.41%
CYP2D6 inhibition - 0.9413 94.13%
CYP1A2 inhibition - 0.9430 94.30%
CYP2C8 inhibition - 0.7088 70.88%
CYP inhibitory promiscuity - 0.7453 74.53%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5738 57.38%
Eye corrosion - 0.9934 99.34%
Eye irritation - 0.9598 95.98%
Skin irritation - 0.8570 85.70%
Skin corrosion - 0.9679 96.79%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7366 73.66%
Micronuclear - 0.6441 64.41%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.9067 90.67%
Respiratory toxicity - 0.7667 76.67%
Reproductive toxicity - 0.6000 60.00%
Mitochondrial toxicity - 0.8500 85.00%
Nephrotoxicity - 0.5711 57.11%
Acute Oral Toxicity (c) III 0.6684 66.84%
Estrogen receptor binding + 0.6334 63.34%
Androgen receptor binding - 0.7141 71.41%
Thyroid receptor binding + 0.6367 63.67%
Glucocorticoid receptor binding - 0.6037 60.37%
Aromatase binding + 0.7167 71.67%
PPAR gamma + 0.7375 73.75%
Honey bee toxicity - 0.8268 82.68%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity - 0.6179 61.79%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.77% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 94.66% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.53% 96.09%
CHEMBL2581 P07339 Cathepsin D 90.23% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.44% 94.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.59% 99.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.62% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.05% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.73% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 83.84% 95.93%
CHEMBL4581 P52732 Kinesin-like protein 1 82.83% 93.18%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.80% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.55% 95.89%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 81.87% 93.65%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.12% 95.89%
CHEMBL4208 P20618 Proteasome component C5 81.00% 90.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 80.83% 94.80%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.43% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.42% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Curculigo breviscapa
Curculigo orchioides

Cross-Links

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PubChem 10411370
NPASS NPC5024
LOTUS LTS0008126
wikiData Q105345098