Ophiopogoside B

Details

Top
Internal ID 7ce67928-1d2d-4c71-a092-2a6fc4fd3e06
Taxonomy Phenylpropanoids and polyketides > Homoisoflavonoids > Homoisoflavans > Homoisoflavanones
IUPAC Name (3R)-3-(1,3-benzodioxol-5-ylmethyl)-5-methoxy-6-methyl-4-oxo-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydrochromene-8-carbaldehyde
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H28O12/c1-11-23(38-26-22(32)21(31)20(30)17(8-28)37-26)14(7-27)25-18(24(11)33-2)19(29)13(9-34-25)5-12-3-4-15-16(6-12)36-10-35-15/h3-4,6-7,13,17,20-22,26,28,30-32H,5,8-10H2,1-2H3/t13-,17-,20-,21+,22-,26+/m1/s1
InChI Key GSIZMWIFEPCTDO-ALXDNBOGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C26H28O12
Molecular Weight 532.50 g/mol
Exact Mass 532.15807632 g/mol
Topological Polar Surface Area (TPSA) 170.00 Ų
XlogP 0.80
Atomic LogP (AlogP) 0.16
H-Bond Acceptor 12
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

Top
(3R)-3-(1,3-benzodioxol-5-ylmethyl)-5-methoxy-6-methyl-4-oxo-7-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy-2,3-dihydrochromene-8-carbaldehyde
(3R)-3-(1,3-benzodioxol-5-ylmethyl)-5-methoxy-6-methyl-4-oxo-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydrochromene-8-carbaldehyde
RefChem:168385
CHEMBL1093536

2D Structure

Top
2D Structure of Ophiopogoside B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5638 56.38%
Caco-2 - 0.8447 84.47%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5286 52.86%
OATP2B1 inhibitior - 0.8559 85.59%
OATP1B1 inhibitior + 0.8317 83.17%
OATP1B3 inhibitior + 0.9667 96.67%
MATE1 inhibitior - 0.9212 92.12%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.8595 85.95%
P-glycoprotein inhibitior - 0.4295 42.95%
P-glycoprotein substrate - 0.6396 63.96%
CYP3A4 substrate + 0.6488 64.88%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8340 83.40%
CYP3A4 inhibition - 0.6376 63.76%
CYP2C9 inhibition - 0.8119 81.19%
CYP2C19 inhibition - 0.7281 72.81%
CYP2D6 inhibition - 0.8963 89.63%
CYP1A2 inhibition - 0.9160 91.60%
CYP2C8 inhibition + 0.5182 51.82%
CYP inhibitory promiscuity - 0.6201 62.01%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6091 60.91%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9388 93.88%
Skin irritation - 0.8352 83.52%
Skin corrosion - 0.9463 94.63%
Ames mutagenesis + 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4255 42.55%
Micronuclear + 0.6433 64.33%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8473 84.73%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.8027 80.27%
Acute Oral Toxicity (c) III 0.7299 72.99%
Estrogen receptor binding + 0.7859 78.59%
Androgen receptor binding + 0.6476 64.76%
Thyroid receptor binding - 0.5895 58.95%
Glucocorticoid receptor binding + 0.6226 62.26%
Aromatase binding - 0.6125 61.25%
PPAR gamma + 0.6325 63.25%
Honey bee toxicity - 0.7653 76.53%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.7866 78.66%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.29% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 98.10% 96.77%
CHEMBL2581 P07339 Cathepsin D 97.83% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.34% 95.56%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 97.31% 94.80%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.69% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 91.14% 94.73%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.55% 96.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.63% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.41% 94.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.30% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.70% 96.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 87.90% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.73% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.22% 85.14%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 85.87% 93.40%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.33% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.08% 99.17%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.69% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.67% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.24% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ophiopogon japonicus

Cross-Links

Top
PubChem 46865773
LOTUS LTS0035528
wikiData Q105017187