Ophiogenin-3-O-alpha-L-rhaMnopyranosyl-(1-->2)-beta-D-glucopyranoside

Details

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Internal ID ec8585c5-e3c9-4583-9a03-84d8b5d5803e
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[2-(2,8-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4(C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)O)O)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3(C(O2)CC4(C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)O)O)C)OC1
InChI InChI=1S/C39H62O14/c1-18-8-13-38(48-17-18)20(3)39(47)26(53-38)15-37(46)24-7-6-21-14-22(9-11-35(21,4)23(24)10-12-36(37,39)5)50-34-32(30(44)28(42)25(16-40)51-34)52-33-31(45)29(43)27(41)19(2)49-33/h6,18-20,22-34,40-47H,7-17H2,1-5H3
InChI Key DGFVATVOFRGGFO-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H62O14
Molecular Weight 754.90 g/mol
Exact Mass 754.41395665 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 0.70
Atomic LogP (AlogP) 0.62
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 5

Synonyms

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128502-94-3
PD127338
FT-0775384

2D Structure

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2D Structure of Ophiogenin-3-O-alpha-L-rhaMnopyranosyl-(1-->2)-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7571 75.71%
Caco-2 - 0.8840 88.40%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.7376 73.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8539 85.39%
OATP1B3 inhibitior + 0.8994 89.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8195 81.95%
P-glycoprotein inhibitior + 0.7205 72.05%
P-glycoprotein substrate + 0.5803 58.03%
CYP3A4 substrate + 0.7325 73.25%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.8348 83.48%
CYP3A4 inhibition - 0.9268 92.68%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9343 93.43%
CYP1A2 inhibition - 0.9102 91.02%
CYP2C8 inhibition + 0.7306 73.06%
CYP inhibitory promiscuity - 0.9302 93.02%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5116 51.16%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9179 91.79%
Skin irritation + 0.4929 49.29%
Skin corrosion - 0.9426 94.26%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7667 76.67%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.5853 58.53%
Acute Oral Toxicity (c) I 0.5904 59.04%
Estrogen receptor binding + 0.7985 79.85%
Androgen receptor binding + 0.7616 76.16%
Thyroid receptor binding - 0.5774 57.74%
Glucocorticoid receptor binding + 0.5377 53.77%
Aromatase binding + 0.6652 66.52%
PPAR gamma + 0.7201 72.01%
Honey bee toxicity - 0.6475 64.75%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.5450 54.50%
Fish aquatic toxicity + 0.9176 91.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.69% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.94% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.34% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 96.39% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.38% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.26% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.18% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.87% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.11% 86.33%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.11% 95.50%
CHEMBL2243 O00519 Anandamide amidohydrolase 87.30% 97.53%
CHEMBL5255 O00206 Toll-like receptor 4 87.03% 92.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.12% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.71% 94.45%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.59% 97.36%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.79% 96.61%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 83.48% 95.71%
CHEMBL2581 P07339 Cathepsin D 83.42% 98.95%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 82.70% 94.23%
CHEMBL259 P32245 Melanocortin receptor 4 81.48% 95.38%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.08% 96.00%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.39% 91.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.12% 92.94%
CHEMBL3401 O75469 Pregnane X receptor 80.06% 94.73%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.00% 91.07%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ophiopogon japonicus

Cross-Links

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PubChem 14526906
LOTUS LTS0267083
wikiData Q104978648