Obelmycin B

Details

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Internal ID cb7351ce-e3eb-4563-830b-3848e2421b84
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name (7S,9R,10S)-7-[(2R,4S,5S,6R)-4-(dimethylamino)-5-[(2S,5S,6S)-5-[(2S,5S,6R)-5-hydroxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-10-[(2S,4R,5R,6R)-4-(dimethylamino)-5-[(2S,5S,6R)-5-[(2S,5S,6R)-5-hydroxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-9-ethyl-1,4,6,9,11-pentahydroxy-8,10-dihydro-7H-tetracene-5,12-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C60H88N2O21/c1-12-60(71)25-40(80-45-23-32(61(8)9)57(30(6)76-45)81-43-21-17-38(28(4)74-43)78-41-19-15-34(63)26(2)72-41)49-52(56(70)51-50(55(49)69)53(67)47-36(65)13-14-37(66)48(47)54(51)68)59(60)83-46-24-33(62(10)11)58(31(7)77-46)82-44-22-18-39(29(5)75-44)79-42-20-16-35(64)27(3)73-42/h13-14,26-35,38-46,57-59,63-66,69-71H,12,15-25H2,1-11H3/t26-,27-,28+,29-,30-,31-,32+,33-,34+,35+,38+,39+,40+,41+,42+,43+,44+,45+,46+,57-,58+,59+,60-/m1/s1
InChI Key QGMYQBMNNRNDNB-LOZFVSBLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C60H88N2O21
Molecular Weight 1173.30 g/mol
Exact Mass 1172.58795782 g/mol
Topological Polar Surface Area (TPSA) 293.00 Ų
XlogP 5.70
Atomic LogP (AlogP) 5.44
H-Bond Acceptor 23
H-Bond Donor 7
Rotatable Bonds 15

Synonyms

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1-Hydroxycytorhodin A
1-Hydroxy-Cytorhodin A

2D Structure

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2D Structure of Obelmycin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7720 77.20%
Caco-2 - 0.8597 85.97%
Blood Brain Barrier - 0.9750 97.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.5476 54.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8733 87.33%
OATP1B3 inhibitior + 0.9339 93.39%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior + 0.9198 91.98%
P-glycoprotein inhibitior + 0.7458 74.58%
P-glycoprotein substrate + 0.7483 74.83%
CYP3A4 substrate + 0.6985 69.85%
CYP2C9 substrate - 0.8284 82.84%
CYP2D6 substrate - 0.7602 76.02%
CYP3A4 inhibition - 0.8686 86.86%
CYP2C9 inhibition - 0.8649 86.49%
CYP2C19 inhibition - 0.8507 85.07%
CYP2D6 inhibition - 0.8474 84.74%
CYP1A2 inhibition - 0.7309 73.09%
CYP2C8 inhibition - 0.5905 59.05%
CYP inhibitory promiscuity - 0.8922 89.22%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6002 60.02%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.8979 89.79%
Skin irritation - 0.7992 79.92%
Skin corrosion - 0.9363 93.63%
Ames mutagenesis + 0.7136 71.36%
Human Ether-a-go-go-Related Gene inhibition + 0.7169 71.69%
Micronuclear + 0.6500 65.00%
Hepatotoxicity + 0.6625 66.25%
skin sensitisation - 0.8949 89.49%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.7612 76.12%
Acute Oral Toxicity (c) II 0.6205 62.05%
Estrogen receptor binding + 0.8224 82.24%
Androgen receptor binding + 0.7779 77.79%
Thyroid receptor binding + 0.5924 59.24%
Glucocorticoid receptor binding + 0.7970 79.70%
Aromatase binding + 0.6776 67.76%
PPAR gamma + 0.8424 84.24%
Honey bee toxicity - 0.7202 72.02%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.8931 89.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.62% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.23% 97.09%
CHEMBL2581 P07339 Cathepsin D 95.92% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.75% 89.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 91.73% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.33% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.19% 95.56%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 90.54% 85.11%
CHEMBL4208 P20618 Proteasome component C5 90.24% 90.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.56% 96.09%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 87.62% 96.37%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.83% 96.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.53% 94.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.28% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.29% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 83.66% 95.93%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.03% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.92% 86.33%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 81.47% 95.64%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.44% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 139589241
LOTUS LTS0046329
wikiData Q105220460