Nosokomycin C

Details

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Internal ID 426429df-46a6-47b7-9386-6da7d24b5baf
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2S,3S,4S,5R,6R)-6-[(2R,3S,4R,5R,6S)-5-acetamido-6-[(2R,3S,4R,5R,6S)-5-acetamido-6-[(2R,3R,4R,5S,6S)-6-carbamoyl-4-carbamoyloxy-2-[[(2R)-2-carboxy-2-[(2Z,5E,13E)-3,8,8,14,18-pentamethyl-11-methylidenenonadeca-2,5,13,17-tetraenoxy]ethoxy]-hydroxyphosphoryl]oxy-5-hydroxy-5-methyloxan-3-yl]oxy-4-hydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-4-hydroxy-2-methyloxan-3-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C58H93N4O28P/c1-27(2)15-14-17-28(3)18-19-30(5)20-23-57(9,10)22-13-12-16-29(4)21-24-80-35(50(72)73)26-81-91(78,79)90-55-46(47(89-56(60)76)58(11,77)48(88-55)49(59)71)87-53-37(62-33(8)65)39(67)44(34(25-63)83-53)85-52-36(61-32(7)64)38(66)43(31(6)82-52)84-54-42(70)40(68)41(69)45(86-54)51(74)75/h12-13,15,18,21,31,34-48,52-55,63,66-70,77H,5,14,16-17,19-20,22-26H2,1-4,6-11H3,(H2,59,71)(H2,60,76)(H,61,64)(H,62,65)(H,72,73)(H,74,75)(H,78,79)/b13-12+,28-18+,29-21-/t31-,34-,35-,36-,37-,38-,39-,40+,41+,42-,43-,44-,45+,46-,47-,48-,52+,53+,54-,55-,58+/m1/s1
InChI Key AMBSTVQRSFZFAG-WKIRDRJHSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C58H93N4O28P
Molecular Weight 1325.30 g/mol
Exact Mass 1324.57139532 g/mol
Topological Polar Surface Area (TPSA) 499.00 Ų
XlogP 0.70
Atomic LogP (AlogP) -0.02
H-Bond Acceptor 25
H-Bond Donor 14
Rotatable Bonds 33

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Nosokomycin C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7507 75.07%
Caco-2 - 0.8590 85.90%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6635 66.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8033 80.33%
OATP1B3 inhibitior + 0.9277 92.77%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8526 85.26%
BSEP inhibitior + 0.9371 93.71%
P-glycoprotein inhibitior + 0.7428 74.28%
P-glycoprotein substrate + 0.8057 80.57%
CYP3A4 substrate + 0.7521 75.21%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.6137 61.37%
CYP2C9 inhibition - 0.7721 77.21%
CYP2C19 inhibition - 0.7299 72.99%
CYP2D6 inhibition - 0.8853 88.53%
CYP1A2 inhibition - 0.7800 78.00%
CYP2C8 inhibition + 0.8140 81.40%
CYP inhibitory promiscuity - 0.8989 89.89%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9000 90.00%
Carcinogenicity (trinary) Non-required 0.5240 52.40%
Eye corrosion - 0.9780 97.80%
Eye irritation - 0.8964 89.64%
Skin irritation - 0.7535 75.35%
Skin corrosion - 0.9139 91.39%
Ames mutagenesis + 0.5446 54.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7170 71.70%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.5950 59.50%
skin sensitisation - 0.8219 82.19%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.8318 83.18%
Acute Oral Toxicity (c) III 0.5902 59.02%
Estrogen receptor binding + 0.6297 62.97%
Androgen receptor binding + 0.7267 72.67%
Thyroid receptor binding + 0.7196 71.96%
Glucocorticoid receptor binding + 0.8022 80.22%
Aromatase binding + 0.7213 72.13%
PPAR gamma + 0.8218 82.18%
Honey bee toxicity - 0.5721 57.21%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9828 98.28%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.84% 91.11%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 98.57% 87.67%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.14% 97.29%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.99% 85.14%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 96.12% 81.11%
CHEMBL3401 O75469 Pregnane X receptor 94.83% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.42% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.75% 99.17%
CHEMBL2581 P07339 Cathepsin D 93.33% 98.95%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 92.70% 96.47%
CHEMBL2413 P32246 C-C chemokine receptor type 1 92.66% 89.50%
CHEMBL340 P08684 Cytochrome P450 3A4 91.47% 91.19%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 91.46% 95.58%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.14% 97.25%
CHEMBL233 P35372 Mu opioid receptor 89.55% 97.93%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.38% 96.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.23% 97.36%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.61% 96.61%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.36% 91.24%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.13% 93.56%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 87.23% 89.34%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 87.05% 94.33%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 86.53% 94.01%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.27% 89.00%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 85.73% 92.29%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.45% 96.90%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.27% 100.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.87% 82.50%
CHEMBL3286 P00749 Urokinase-type plasminogen activator 83.77% 97.88%
CHEMBL279 P35968 Vascular endothelial growth factor receptor 2 83.59% 95.52%
CHEMBL2474 P53582 Methionine aminopeptidase 1 82.83% 97.09%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 82.70% 91.03%
CHEMBL288 Q08499 Phosphodiesterase 4D 82.58% 97.50%
CHEMBL4662 P28074 Proteasome Macropain subunit MB1 82.51% 93.85%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.41% 95.83%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.32% 96.21%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 82.04% 95.71%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.93% 91.07%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.75% 93.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.54% 99.23%
CHEMBL251 P29274 Adenosine A2a receptor 81.53% 94.40%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 80.89% 97.31%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.46% 94.45%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 80.35% 97.47%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.24% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 102041023
LOTUS LTS0261287
wikiData Q104914552